Paenibacillus polygoni: QPK24_02430
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Entry
QPK24_02430 CDS
T09587
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03420
Nucleotide excision repair
ppog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QPK24_02430
03430 Mismatch repair
QPK24_02430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_02430
Enzymes [BR:
ppog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK24_02430
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QPK24_02430
MMR (mismatch excision repair)
Other MMR factors
QPK24_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
YdjO
UvrD_C_2
AAA_30
AAA_12
DUF7222
Motif
Other DBs
NCBI-ProteinID:
WIV19624
UniProt:
A0ABY8X388
LinkDB
All DBs
Position
complement(491197..493551)
Genome browser
AA seq
784 aa
AA seq
DB search
MYSTNPIFYPRPLGVPSSARMPKAKEAPEQTSLELVHDTEPDAEYFRSLEEAGILLNGPQ
IKAVRHGDGPILTLAGAGCGKTTVLAARAGYLIKVRNVAAGSILLVTFTSKAAAEMKSRI
STLPGIRSAAARAVQARTFHSFALMLLRHYGVTEDIFGDMRAQHTVIKMIQRKHGLSDAF
QPESLLSSLSTWKMEGKRTEDLPETSQEEREVKQILTGYEAWKKERHKMDFDDILLRAAE
LLNDPAILRPLQKRFQYIMVDEFQDTNSLQYEIVRKLAASHRNLMVVGDDDQTIYTFNGA
RQEAILDFDKVYPRASIVTLDINYRSDARILGLGTEIVRYNKKRRYKKLVSAGKPGYQPL
FATPSGVEEEAAMVVSHIQEIIEEGHLSYQDIAILHRTASSSRAIFEQLVLKEIPFVQYG
ATPVFYDQTLVKPLMDHLRLSLHPRNFDAIPSTLGPLYISREAGLEYLAGQEKLQPKKYP
LIHFSRWDRLKPFQQEQVKERIKLIKQLQTMTPLAAIQEMRRQFYDSYLESGDPSIYTHY
KETIMETLDELEASVKRFETVESFVTFADELSRRHKEMEALQAANEDAVQLMTIHRAKGL
EFPCVYWIGASEGILPHSSALTKEVPEDRKAALTGAAAKEVDEALLEEERRLAYVAVTRA
KQRLFITSPASQHGKPAPVSRFLLEAFGVKDTGHKKQSAKERLNTDKDRFHSKSKIHSSS
SSPMKGSSQRMETVPVWSCTSDTCPAWIRQHAGKPKEEAPPCPLCKSKMKKTMREVPALP
RHLK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcacaaatcctatattttatcctcgccctttaggggtcccttcgagtgcccga
atgcctaaggcgaaggaagcgcccgaacaaacaagcctggagcttgttcacgatacggaa
ccagatgccgaatacttccgatcgctcgaggaagccggtattctgctgaacggtccacag
attaaagccgtaaggcatggtgacggtcctattttaactttggcaggagctggttgcggg
aaaacgacggttcttgcggccagggccggctaccttattaaagttcgaaacgtagctgcc
ggcagtatcctgctcgtcacttttactagtaaagccgctgcagagatgaaatctcgtatt
tcgacacttccgggtattcgttctgctgctgcaagagctgtacaagcaagaacattccac
tccttcgctttaatgttacttcgtcactacggggtaacggaagatatttttggtgacatg
agagcacagcataccgtaataaaaatgattcagcgcaagcatggattaagcgatgcattt
cagccggaaagcctgctctcttctctctctacctggaagatggaaggtaaacgtaccgaa
gatcttccagagacgtcacaggaagaaagagaggtaaaacagattcttactgggtatgaa
gcatggaagaaagaacgtcacaagatggactttgatgatattttgctgcgagctgcggaa
ctgttgaatgatcctgccattctgcgcccgcttcagaaacgattccaatatattatggtg
gatgaattccaagataccaacagtcttcagtacgaaattgtacgtaaactcgcagcttcc
caccggaacctcatggtagtcggtgatgacgaccagacgatctatacctttaatggagca
agacaagaagcgattcttgattttgataaagtctatcctcgggcatcgatcgttacactg
gatattaattaccgttccgacgctcgcattcttggacttggcacagagattgtacgttat
aacaagaaacgtcggtataaaaaactggtttccgctggtaagcctgggtatcagccattg
tttgccactccttctggagtggaagaagaggcagcgatggtcgtcagtcatattcaggag
ataatagaagaaggacacctttcgtaccaggatattgcgatcctgcaccggacagcaagc
agcagccgtgctatttttgaacagctagtcctaaaagagattccttttgtacaatacggg
gctacccctgtcttctacgatcagactttagtgaagccgctgatggatcacctaaggtta
tctcttcacccgcgtaattttgatgcgattccaagtacactcggccctttatatatctcg
cgtgaagcaggtctcgaatacttggcaggacaagagaagctgcagcctaaaaaatatccg
ctcattcatttttcgagatgggatcgtctgaaaccttttcagcaagaacaggtcaaggaa
cgaattaaactgattaagcagctgcagacgatgactccgcttgcggcgattcaggaaatg
cgcagacagttctacgattcgtatcttgagagcggcgatccaagcatctacacgcactat
aaagaaacaattatggaaacactggatgagcttgaggcctctgtaaaacggtttgagacc
gtggagagttttgtcacctttgcagatgaactatcccgaagacataaagagatggaagct
ctgcaagcagccaatgaagatgccgtacagctgatgacgattcacagagccaaaggtctc
gaattcccctgcgtttactggattggtgcaagtgaaggaattcttccgcatagttctgct
ctaaccaaagaagtgcctgaggaccgaaaagcggcactgacgggcgcagctgccaaagaa
gtggatgaagctttgctagaggaagaacgcagacttgcttatgttgctgttacgcgtgcg
aagcagcgattgttcattacctcacctgctagtcagcatggtaagccggctcctgtctct
agatttctgctggaagccttcggcgtcaaagatacaggccacaagaaacagagtgccaaa
gaacgtttaaatacggacaaagaccgcttccactcgaaaagcaagatacacagctcttct
tcctctcctatgaaaggaagctcgcagcggatggagaccgttccggtatggtcatgcaca
tcagatacttgtcctgcctggattcgtcagcacgccggcaaaccgaaggaggaagcgccg
ccttgcccgctctgtaagtcaaaaatgaaaaaaacgatgcgggaagtacctgctttaccg
agacatctgaagtaa
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