Paenibacillus polygoni: QPK24_05900
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Entry
QPK24_05900 CDS
T09587
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QPK24_05900 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppog03019
]
QPK24_05900 (recQ)
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_05900 (recQ)
Enzymes [BR:
ppog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK24_05900 (recQ)
Messenger RNA biogenesis [BR:
ppog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QPK24_05900 (recQ)
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QPK24_05900 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WIV20230
LinkDB
All DBs
Position
1236207..1238084
Genome browser
AA seq
625 aa
AA seq
DB search
MSIQTKTMAEAQEMLQTYFGYPDFREGQKKIVESLLQHNDTLGIMPTGGGKSICYQIPAL
LYPGLTLVVSPLISLMKDQVDALLAMGIPAAYINSTLSGREVNDRIRAARSGELKMLYVA
PERLELDWFRDEMAELPISCVAVDEAHCVSQWGHDFRTSYLSVAPFVEYLPERPIVAAFT
ATATPAVMEDILRLLRLRNPETFVTGLGRDNLAMQVLRGENKKEYVMDYAREHADEAGII
YAATRKDVDDLYSRLQEAGIAAGRYHAGMTDEERAASQEAFLFDDLRVIVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSQCILLFSAQDIMTQKFLLEQGDADPER
KRNDYRKLQQMIDYCYTTKCLRSAQLDYFGEAHDDTGCGICSSCTDDRELIDMTVDAQKI
FSCIHRMRERFGVSLVSMVLKGSRNKKVLEYGFDSLPTYGVMSNRTEKEISEIINVLASE
GYLALSEGQYPVLRLQPLAVEVLKGQREVMQRVARVSVASSRSSRSSRTSKRDMSPSAVN
ETIFEQLRLIRREMAEREHVPSYIIFNDATLREMSVVCPQSERDMLKIKGVGEVKYRKYG
QPFLDFFLNQGSSEVEAPAYDPFEF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcagacaaaaacaatggcagaagcgcaggagatgctgcaaacttattttgga
tatcctgattttcgggagggtcagaaaaagattgtagaaagcctgcttcaacataacgac
acactcggcattatgccgacaggcggcgggaaatcgatctgttaccagattccggctttg
ctgtatccgggtctgactttggttgtgtcaccgctgatttcattaatgaaggatcaggtc
gatgcactgcttgccatgggcattcctgctgcttatatcaatagtacgctgagcggacgt
gaagtgaatgaccggatcagagctgctcgcagcggtgaactgaagatgctgtatgttgca
ccggagcggcttgaactggactggttccgtgatgaaatggcagaacttccgatttcttgt
gtagcagtggatgaggctcactgtgtatcgcagtgggggcatgattttcggacgagttat
ctatcggtagctccttttgtggaatatttgccggagcgcccgattgtagccgcctttact
gcaaccgcaactccggcagtaatggaagatatcctaagactgctgcgtttacgtaatccg
gagacgtttgtcacaggactagggcgagataatcttgcgatgcaggtcctgcgcggggag
aacaaaaaagaatatgtaatggactatgcccgtgaacatgcggacgaagcggggattatc
tatgctgcgacacgtaaggatgtagatgatctgtacagccgtttgcaagaggccggaata
gcggcagggcgttatcatgcaggaatgacagatgaagagcgcgcagcaagtcaggaagct
ttcttgttcgatgatctaagagtgattgtggcaacgaatgcatttgggatgggtatcgat
aaaagtaacgtgagatatgtgatccattataatatgccgaaaaatatggaagcctacgtt
caggaggcaggacgtgcaggtcgggacggcgaaccgagtcagtgtatcctgctgttcagc
gcgcaagatatcatgactcagaagttcctgctggagcagggggatgcagatcctgagcgc
aagcgcaacgattatcgtaagcttcagcagatgattgattattgttatacgacgaagtgt
ctgcgcagtgcgcaactggactattttggagaggctcatgatgatacgggctgcggaatt
tgcagttcttgtacggatgatcgggaactcattgatatgaccgttgatgcccaaaagatt
ttctcctgtattcaccggatgagagagcgttttggcgtgtcgcttgtgtcgatggtactc
aaaggttcgagaaacaaaaaagtgctggaatatggttttgacagtttgcctacgtatgga
gtgatgtcgaatcgtacggaaaaagaaatctctgaaatcattaacgtactcgcctctgaa
ggatatcttgctttgtcggaaggacagtaccccgtgctgagacttcagccgcttgcggtc
gaagtactgaaaggacagcgcgaagtgatgcagcgagtggcgagagtaagtgtggcttct
tcaagaagcagcagatcttctagaacaagtaaacgagatatgtctccatctgcggtgaac
gagacaatattcgaacagctgagactgattcgccgtgaaatggcagagcgggagcatgta
ccgtcctatattatttttaatgatgcaacgcttcgagagatgagtgtggtatgtccgcag
agcgaacgtgacatgctgaagattaaaggggtcggagaagtgaagtaccggaaatacgga
caaccttttctcgatttcttcttgaaccaaggaagtagtgaagtagaagcaccagcttat
gatccttttgaattctaa
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