Paenibacillus polygoni: QPK24_09060
Help
Entry
QPK24_09060 CDS
T09587
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppog
Paenibacillus polygoni
Pathway
ppog02020
Two-component system
ppog02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QPK24_09060
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QPK24_09060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppog03021
]
QPK24_09060
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppog02035
]
QPK24_09060
Transcription machinery [BR:
ppog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QPK24_09060
Bacterial motility proteins [BR:
ppog02035
]
Flagellar system
Flagellar assembly proteins
Stator
QPK24_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
HTH_38
HTH_23
PhyR_sigma-like
Csa3_N
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
WIV20804
UniProt:
A0ABY8X7Y0
LinkDB
All DBs
Position
1880720..1881508
Genome browser
AA seq
262 aa
AA seq
DB search
MKESNSSHLADMDLWEKWKEHGDLDARKTLIEKHLHIVHYVSSRLAVGLPKNVSKDDLES
NGALGLIDALDKFDYKRGLQFETYASWRVRGAILDGLRQGDWVPRSVREKAKRIEEAYQH
LEQKYSRTVSDEEMGQYLDLSAKDFQHMVQEVAVMSLYSLEDPLREEDAETRMSLLVDER
AYPPEQTVRDIHLKQALVTGLDKLTEKERIVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLEKQRELLMNRD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatctaattcatcccatctggccgacatggacctgtgggaaaaatggaaggag
cacggggatttagatgctaggaaaaccttgattgagaagcatctccatatcgttcattat
gtatccagcaggttagcagtaggattgcctaaaaatgtgtccaaagatgaccttgagagc
aatggtgcgctagggctcatcgatgcacttgataaatttgattataaaagagggcttcaa
tttgagacctatgcctcttggagagtaagaggagcgatactggatggtcttcgccaagga
gactgggttccacgttcggttcgtgagaaagcaaaacgaatagaagaagcttatcaacat
ttagaacagaaatactcccgtaccgttagtgatgaagagatgggacaatatttagattta
tcagctaaggattttcaacatatggtacaagaagtagcggtaatgtcgttatattcactt
gaagatccgctgagagaagaagatgccgagacaagaatgtcactattggttgatgagaga
gcttatcctcctgaacaaacggttcgtgatattcatctaaaacaagcactagtcactgga
ttagataaacttacggaaaaagaacgaatcgtcgtatctcttctatattatgaagactta
tctcttagtgaaattgcagaagtaatgtctctatcaccatctcgaatttctcagttgcat
tctaaagcgattttacgccttcgaggaactcttgagaagcagcgtgaactgttaatgaat
cgggattaa
DBGET
integrated database retrieval system
