Paenibacillus polygoni: QPK24_09185
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Entry
QPK24_09185 CDS
T09587
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QPK24_09185 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppog03019
]
QPK24_09185 (pnp)
03016 Transfer RNA biogenesis [BR:
ppog03016
]
QPK24_09185 (pnp)
Enzymes [BR:
ppog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QPK24_09185 (pnp)
Messenger RNA biogenesis [BR:
ppog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QPK24_09185 (pnp)
Transfer RNA biogenesis [BR:
ppog03016
]
Prokaryotic type
tRNA degradation factors
QPK24_09185 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
WIV20828
LinkDB
All DBs
Position
1906997..1909093
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AA seq
698 aa
AA seq
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MEQRVEMQLGGRTLILETGRLAKQANAAVTVRYGDTVILCTVTASTEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILASRLTDRPIRPLFPEGFRNDVQIQNIVMSVDQD
CEPEIAAMIGTSAALSISDVPFNGPIGGVAVGRVNGEFVINPDVAAQEASDIYVVVAGTK
DAIMMVEAEANEVPEEVMLEAIMFGHEEIKNIVAVIEQLVQVAGKEKMAVKLHAVNADVN
AEVREYAAARLVEAVRIEEKHARQDAIDVINDETVAFFGDKYIETPELLKDVKEILHDIV
KEEVRRLITHDKVRPDGRALSEIRPIDCDTNLLPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGIDLEETKRFMHHYNFPPFSVGEARPLRPPGRREIGHGALGEKALSKVIPSETEF
PYTIRLVSEVIESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGDHVSILTDI
QGMEDHLGDMDFKVAGTSEGVTAIQMDIKIDGIDRNILSEALSQAKEGRMHILGKMMEAI
QKPRETLSKYAPKILTMHINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFISSAD
QSMNDKAREIIEGIVREVVVGEIYVGKVKRIEKFGCFVEVLPNKEGLVHISQLSTERVAK
VEDVVSIGDSITVKVTEIDQQGRINLSRKATLTAETKA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacgtgttgagatgcaacttggcggcagaacactgattctagaaacaggacgt
cttgctaaacaggcaaacgctgctgtaactgtacgctatggagataccgttattttatgt
accgtaacagcgtcaactgaacctaaagatttggactttttcccgcttacggttaactat
gaggaaagactatatgcagtaggtaaaattccaggtggattcattaaaagagaaggtaga
ccgagcgagaaagcgattcttgccagccgtctgacagatcggcccatccgtcctctattc
ccggaaggtttccgtaatgatgttcagattcaaaatatcgtaatgagcgttgatcaagac
tgcgaaccagaaatcgcagcaatgatcggtacttctgcggcactaagtatttcagatgtt
ccatttaatggacctatcggcggagtagctgttggccgtgttaatggtgaatttgtaatt
aacccagatgttgctgctcaagaagcaagtgatatctacgtggtggttgcaggaacgaaa
gatgcgatcatgatggtagaagcagaagcaaatgaagtaccagaagaagtaatgctcgaa
gcgattatgtttggtcatgaggagattaaaaacatcgttgctgtaatcgaacaattggta
caagttgctggtaaagagaaaatggctgtcaaattgcatgcagtgaatgcggacgttaac
gctgaagttcgcgagtatgcagcagctcgtctcgttgaagcagttcgtattgaagaaaaa
catgcaagacaagatgcgattgatgtaattaacgatgaaacggttgctttctttggtgat
aaatacatagaaactcctgaattgttaaaagacgtgaaggaaatccttcatgacatcgtt
aaagaagaagttcgcagactgatcacgcatgataaagtgcgtccagatggacgagcattg
tctgaaattcgtccgatcgattgcgatacaaatctcttgccgcgtacgcatggatctggc
ttgtttactcgtggacaaactcaggcgctcagcgtatgtacattaggagcactaggcgat
gttcagattctagatggtattgatctggaagaaaccaaacgcttcatgcaccattataac
ttcccgccgtttagtgtcggtgaagcaagaccgcttcgtcctccaggtcgtcgtgaaatt
ggtcatggtgcactcggtgaaaaagcattgtctaaagtaattccgtctgagactgaattc
ccttatacaattcgtcttgtatctgaagttattgaatcaaatggttctacatctcaggct
agtatctgtgcttcaacacttgctatgatggatgctggggtaccaattaaagcacctgta
gctggtgtggcaatgggtctgattaaagatggagatcatgtatcgatcctgactgatatt
caaggtatggaagatcatcttggagatatggactttaaagtagccggtacttctgaaggg
gttaccgcaattcaaatggatattaagatcgatggtattgatcgtaatattctatctgaa
gctctaagccaagcaaaagaagggcgtatgcacattcttggtaaaatgatggaagctatc
caaaaaccaagagaaaccttatctaagtatgcacctaagattcttaccatgcacattaac
ccggataagatccgtgatgttattggagcaggcggtaaaatcattaacaagattattgag
gaaacgggcgttaaaatcgatatcgaacaagatggccgtgtattcatctcttctgctgat
caatccatgaatgataaagctcgcgaaattattgaaggcatcgttcgtgaagtggttgta
ggtgagatttatgtaggtaaagtaaaacgtattgagaagtttggctgctttgtagaagta
cttcctaacaaagaaggacttgtgcatatctcccagctgtctacagaacgtgtagctaaa
gtggaagacgtggtctctattggagattctattacagtaaaagtaacagaaatcgaccaa
caaggacgcatcaatctttcccgcaaagcaactttgactgcagaaacaaaagcttaa
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