Paenibacillus polygoni: QPK24_13440
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Entry
QPK24_13440 CDS
T09587
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
ppog
Paenibacillus polygoni
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
QPK24_13440 (tnpB)
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
PAP-OAS1
Ribosomal_L37ae
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
WIV17431
UniProt:
A0ABY8WZ30
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Position
complement(2788320..2789471)
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AA seq
383 aa
AA seq
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MLVNKAYKFRIYPNKNQEILIAKTIGCSRFVFNRFLAKWNEAYRETGKGLNYNTCSSQLT
ELKKELVWIREVDSIAMQSSLKSLADSYTRFFKKQNQAPRFKSKKNKVQSYTTKHTNGNI
GIVENKIKLPKLGFVRFAKSREVEGRILNATIRRNPSGKYFVSILVEIEVHPLEKTGSSV
GIDVGLKDFAILSTGRVFGNPKWFRKLEKKLADAQRVLSRRQELALKRKCKVDEAKNYQK
QKRKVALMHEKIKKARIDYLQKVSTEIIKNHDVIGIEDLQVVNMLKNHNLAKAISEASWS
QFRTMLEYKAKWYGKQLVVVSKTFASSQLCSCCGYKNKDVKNLNLRIWECPSCGTYHDRD
INAGQNLKNEATRLLTIGTMGIA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcaataaagcatacaaatttcgtatctatccaaacaaaaaccaagaaatctta
attgcaaaaacaatcggatgttcacgttttgtattcaatcgctttttagcaaaatggaac
gaagcttacagggaaacaggcaaaggattaaattacaatacatgttcttctcaattaaca
gaactaaagaaagaattggtttggataagggaagttgacagtatcgccatgcaatcatca
cttaaaagccttgctgactcatatactcgattctttaagaaacaaaatcaagcacctcga
tttaagtctaaaaagaataaagttcagtcctatacaactaagcatacgaacggcaatatt
ggcattgtcgaaaacaaaatcaaattacctaaacttggttttgttcgctttgccaaaagt
cgtgaggttgaaggacgtattcttaacgctacaattagacgtaatccaagtggtaagtat
tttgtatctatccttgttgagatagaagtgcatccattagaaaaaacaggctcttctgtt
gggattgatgttggattaaaagattttgcaatcctttcaactggaagagtatttggtaat
cctaaatggtttcgtaaactagaaaaaaaattagctgatgcacaacgagttctttctaga
cgacaagaattagcacttaaacgaaaatgtaaagtggatgaagcaaaaaattatcaaaag
caaaaacgcaaagtagcacttatgcatgaaaaaataaagaaagcgagaatagactactta
caaaaagtctctactgaaatcatcaaaaatcacgatgtcattggtattgaagatttgcaa
gtggtaaacatgctaaaaaatcataatttagctaaagcgattagtgaagcatcgtggtca
cagttcagaacaatgttggagtacaaggcaaaatggtatggcaaacaattagttgttgtg
tctaaaacattcgctagttctcaattgtgttcgtgttgcggctataaaaacaaagacgtt
aagaatctcaatcttcgtatatgggaatgcccttcttgtggcacttaccacgatagagat
attaacgcaggacaaaatctgaaaaatgaagcgacaaggcttctaaccataggaactatg
gggatagcttag
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