Paenibacillus polygoni: QPK24_15575
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Entry
QPK24_15575 CDS
T09587
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QPK24_15575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_15575
Enzymes [BR:
ppog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QPK24_15575
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QPK24_15575
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QPK24_15575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WIV17828
LinkDB
All DBs
Position
complement(3253263..3254081)
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AA seq
272 aa
AA seq
DB search
MPELPEMENYRKLLSERILDQSITNVTVSREKSINVTPEVFEKELVNERIVYIERRGKHL
IFHMSTGKRLVLHLMLGGILYIGTEQERPKRSTQVEIEFGEVVLYFIGLRLGYLHLLSAK
ETDELMSDLGPEPLDYRFTLEKFKERLKGRRGTIKTTLVNQRVIAGIGNCYSDEIAFAAS
LRPDTKIQDVLLNEDALSRLYHAIQSVLREATAGGGYMEMPLYAGDELTGKYDEQCRVYD
REGETCTRCNEGIINKVEITGKKAFFCPVCQH
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccggagatggagaactaccgaaagttattatcggaacgaatactggat
caatccattacaaacgttaccgttagccgagaaaaatcaattaatgtaactccagaagtt
tttgaaaaagaacttgtaaatgagcggattgtttatatcgagcgcaggggtaaacatttg
atttttcatatgagcacgggtaaaagacttgtactgcatctcatgcttggaggcatactt
tatatcggaacagaacaagagcgtccaaaacggtcaactcaagtggaaattgaatttggt
gaagtcgttctttattttatcggcctgagactcggttatcttcacttattgagtgctaaa
gagacggatgagctcatgtctgatcttggacccgaacctcttgactatcgttttacgtta
gaaaagttcaaagaacgattaaaaggtagaagaggtacgataaaaacaacacttgtgaat
cagcgtgttattgcgggaattgggaactgttattccgatgaaatcgcttttgctgccagt
ctaagacctgatacgaaaatacaagatgttcttcttaacgaggatgctttatcaagactc
tatcatgcgatccaatctgttctgcgcgaagcgactgcaggcgggggttacatggaaatg
ccgctgtatgcaggtgacgaattgacaggaaagtatgatgaacagtgccgtgtctacgac
cgagagggtgagacctgcacgagatgtaacgaggggatcattaataaagtggagattacc
gggaagaaagcttttttctgccccgtatgtcagcattga
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