Paenibacillus polygoni: QPK24_16300
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Entry
QPK24_16300 CDS
T09587
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppog
Paenibacillus polygoni
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppog03032
]
QPK24_16300
03036 Chromosome and associated proteins [BR:
ppog03036
]
QPK24_16300
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_16300
DNA replication proteins [BR:
ppog03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QPK24_16300
Chromosome and associated proteins [BR:
ppog03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QPK24_16300
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QPK24_16300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
HU-DNA_bdg
DUF1512_C
DUF937
Motif
Other DBs
NCBI-ProteinID:
WIV17965
LinkDB
All DBs
Position
complement(3409151..3409423)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSDLITQVAESTELPKKDVTKAVDAVFEAISEALQKGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPASKIPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaatcggatctgatcacacaagtagctgaatctactgaactgcctaagaaagat
gtaacgaaagcggttgatgccgtattcgaagctatttctgaagcgttgcaaaaaggtgac
aaagtacaactcgttggttttggtaactttgaagtacgcgagcgttctgcacgtaaagga
cgtaacccgcaaacaggtgaggaaatcgaaattccagcgagcaaaattcctgcttttaaa
ccaggtaaagcgctcaaagacggaatcaaataa
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