Paenibacillus polygoni: QPK24_17235
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Entry
QPK24_17235 CDS
T09587
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QPK24_17235 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_17235 (priA)
Enzymes [BR:
ppog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK24_17235 (priA)
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QPK24_17235 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PIF1
Cas3-like_C_2
nSTAND_NTPase5
Zn_ribbon_6
Zot
T2SSE
DAP3
AAA_30
ADDB_N
SLFN-g3_helicase
AAA_16
AAA_19
AAA_22
nSTAND3
TrwB_AAD_bind
DUF6953
Flavi_DEAD
Zn_ribbon_ISL3
NB-ARC
nSTAND6
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
WIV18137
UniProt:
A0ABY8WYA1
LinkDB
All DBs
Position
complement(3593185..3595770)
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AA seq
861 aa
AA seq
DB search
MKIAKVIVDVPAKDTDREFDYLIPESLLGWVEVGSRVGVPFGHRTVQGFVISIADHTNTT
FKLKPIGELLDLVPPLSPDLIELAGWMSKRYASNRILTLQAMIPTALKGKAKRYISVNSE
TQEQSAAESTKSKDSSVPRSIHKTDSVLFDLPEDNETFKVKNEIIRYVRSKEQVTLDHLG
KRYPEDADLIKELLRTGVLQENQSIKDKLQKKTLRSIDLAVSLEEAEAALADFPAKGKRQ
KEVLSYLIEMSSFLPMALKEVLSGLQVSAGTVKGLEDKGLVVLEDVEVFRDPYKGRHFTP
TQPLPLTLEQQAVYQKIVEKLDERKQGVFLLHGVTGSGKTEVYLQTIQRAIEQDRQAIVL
VPEISLTPQMVERFKGRFGDQVAVMHSRLSGGERYDEWRKIREGKAKVAVGARSAVFAPF
EHLGLIIIDEEHETSYKQEETPKYHARDVAVERARQQGAVVILGSATPSMESYYAARSQS
NDEFAPVLLEMPTRALGNELPVVHIVDMREELKDGNRSMFSRALHKGIAERIEKGEQTVL
LLNRRGYSTFVMCRSCGYVATCPECDISLTYHQRSNNMRCHYCGYAEVVPEVCPDCGSEH
IRYFGTGTQRVEEELAKLFPGVRVIRMDVDTTTEKGSHEKLLKAFREKKADILLGTQMVA
KGLDFPDVTLVGVITADSALNLPDFRAAEKTFQLLTQVAGRAGRHQLPGEVFVQSYTPEH
YSIVHASKHDFNHFIREELKHRKILQYPPYCRLILVTFSHEQLPLLVRAAENYTRMLKEQ
AGKRGQLGSLDKFSADALDVLGPVASPMARLKNRYRFQCMVKWRGDIDATGLVRDIARQM
EQDFQGKDLLISIDVDPQMLM
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
ttgaagattgcgaaagtaattgtggatgtaccagcgaaggatactgaccgcgaattcgat
tatttaattcccgaatcccttttaggctgggtcgaagtaggaagcagggtgggagtccct
tttggccatcgaacagttcaagggtttgtaatctccatcgcggatcatacaaatacaacg
ttcaagttgaagccgattggagaattacttgatcttgtaccaccgctttcaccagatctc
attgaactcgcaggatggatgagcaagcggtatgcttccaatcggatccttacgctgcag
gcaatgattccaacggctctaaaaggaaaggccaagcgttatatctcagtcaacagtgag
acacaggaacaatctgccgcagaatctacgaagagcaaggattcatccgtacctagaagt
atacacaagacggacagcgtactatttgatctgcccgaagataatgagacattcaaagtg
aaaaatgaaattattcgatatgttcgaagtaaggaacaagtcacattagatcatttaggt
aaacggtaccctgaagacgctgaccttattaaagagctgcttcgtacaggtgtgcttcaa
gagaaccagtcgattaaggataagctgcaaaagaaaacactgcgttctattgaccttgcg
gtctcattagaggaggcagaggctgctcttgccgattttccagcaaagggaaagagacaa
aaagaagtgctttcttatttgatagagatgagctcttttttgcccatggcattaaaagaa
gtgctctctggcttacaggtatccgcgggtacagtgaagggtttagaggacaaggggctt
gttgtacttgaagatgtcgaagtatttcgcgatccttataaaggacggcacttcacacct
actcagccgctgcctttaactttggaacagcaggctgtatatcagaagattgtggagaaa
ttggacgagcgcaaacaaggggtattccttttgcacggagtaaccggaagcggaaaaaca
gaagtgtatttacagacaatacagcgggcgattgagcaagatcgtcaggctattgtcctc
gtccccgaaatatcactcacccctcagatggtcgagcgatttaaggggcgttttggtgat
caagtcgctgtgatgcacagcagactctctggcggggaaagatacgatgaatggcgtaaa
attcgtgaaggtaaggcaaaagtagccgttggggctcgttccgccgtatttgctcctttt
gaacacctgggtctcattatcatagatgaagaacacgaaacttcttataaacaagaagaa
acgccgaagtatcacgcaagagatgtagcagtagaacgtgctcgtcagcagggagctgtc
gttattcttggctctgcaacgccttccatggaaagttattacgctgcaagatcgcaaagc
aatgatgaattcgcgccggtactgcttgagatgcctacgcgtgcgcttggaaatgaactg
cctgttgttcacattgtagacatgcgagaagaacttaaggacggcaaccgttccatgttc
agccgggctctacataaagggattgcggagcgaattgaaaagggtgaacagacggtattg
ctgctaaaccgaagagggtattctacctttgtaatgtgccgaagctgcggttatgtggca
acctgccccgaatgtgatatttcgttaacatatcatcagcggtcaaataatatgcgatgt
cactactgcggatatgcagaagtggtaccagaggtttgtcctgactgcgggagtgaacat
attcgttactttggaaccggtacgcagcgggtagaagaagaactggcgaagttgttccct
ggcgttcgagtgattcgtatggatgtagatacaacaacagaaaaaggatcacacgaaaaa
ctgctgaaagcttttagggagaaaaaagccgatattttgcttggaacgcagatggtagca
aaagggcttgattttccagatgtcactcttgtcggtgtaattacggctgattcggcgctg
aatttacctgatttccgtgcagcggagaaaacattccaattgctgacacaagttgcaggc
cgagcaggaaggcatcaactgcctggggaagtattcgttcagtcttacacgccagaacat
tattctatcgttcatgcaagcaagcatgatttcaaccattttattagggaagaattaaag
catcgcaagattttgcagtatcctccttattgccgtttgatcctcgtcacattctcacat
gaacagcttccactgcttgtgcgagctgctgaaaactacacgaggatgctcaaggaacag
gctgggaagcgaggacagcttggaagtctagataaatttagtgctgatgctttggatgta
cttggaccggtagcctctccgatggcgagactgaagaatagatacagatttcaatgtatg
gtaaaatggcgtggtgatatcgatgccaccgggcttgttcgggacatcgctcgtcaaatg
gaacaagattttcaagggaaagatttactgattagtatagatgttgatccgcaaatgctg
atgtaa
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integrated database retrieval system
