Paenibacillus polygoni: QPK24_18170
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Entry
QPK24_18170 CDS
T09587
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ppog
Paenibacillus polygoni
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_18170 (addA)
Enzymes [BR:
ppog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK24_18170 (addA)
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QPK24_18170 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_16
AAA_30
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WIV18308
LinkDB
All DBs
Position
complement(3789573..3793715)
Genome browser
AA seq
1380 aa
AA seq
DB search
MRSIPKPEGSFWSDDQWKAISSSGEDMLVAAAAGSGKTAVLVERIIRKISDENAGFSVDR
LLVATFTKAAASEMRERIRDALETALEKQPENEHLRRQLSLLGRASITTLHSFCMEIIRR
YYQQIPLDPGFRILNEYEAELMRQELLMDLFEQKYSEEGEGSTFRRLVDWFSGERSDDAM
YRLVQKLYDFSRSHSWPSYWLEEMAASFRVNSVEELGQSTWVKSIMRDAELALGGAVLLL
EQALHIAKEPEGPAAYAETFNSDLEMVNELLSRVKNGAWDELYDVFHQSEFGKLKAVRKG
QADPSLQERAKERREAAKKTVTELKTALFGRTPEQFFDEMNKAAPLMEELASVVNQFARV
FTEEKKARGVVDFSDLEHYALQILRDADSTPEQTIPSDAALEYQQQFDEVLLDEYQDTNT
VQEDIVSLISRKEPGNRFMVGDVKQSIYRFRLAEPGLFLDKYRRYDTEGQGDGLRIDLAR
NFRSRLEVVSAVNMLFRQIMNVGVAEIEYDDAAALSFGASFPDVPVDGRYTPELIMIDRA
GSEVPEQPENAGEDGAASEVIEQLEMETAELEARVIAARIHEMVGNTGNPLPVYDKNTKE
MRPARYGDIVILLRSAQLWTPLIMEQLKRVGIPVIGDQNKGFFQATEIEIMLSLLQVVDN
PQQDIPLASVLRSPIVGLDEEELAVIRLAGKRLSFYDAMRSTIENLEKETGTNLEKETSE
FNSTGHISSNKTDDIEQLEAQMALDLGIKEASAALEVIDTLGDPRTDVHIEESQSDSLLF
KTNLLRKLTAFSDFLEEWRHEARSGSLSELIWRIYRDTGYLDWVSGLPGGVQRSRNLKAL
YDRAKQYENSTANRGLFRFLTFISRLKDNGGDLGAVGIAADTEGSVRIMTIHRSKGLEFP
IVFVAGMSKMFNQQDLNAPFMMHKELGFGPRFVDEENRVSYPTLASLAIRRRAHAELLAE
EMRVLYVALTRPKEKMILIGTVKDAAQKAMNWSQIKNHQALLLPETLLASGRSYMDWIGP
AVFRHPDAWHLRALAGIEDEETGRDLGQPGLFDVQDDSRWRISVLSAESVSSSLDASMNE
AADEINEDWQQVTRALMNLSPVETSVSEESENQKRKIDEVLSWTYPYTASAHTAASTSVT
EMKVLLAMQEHPPLGLIEEKVLHDEEGRLAVNDEFTLHLRRPKFMEESRLTGTERGTVYH
TLMQHVPAEPGLTVSTAKAVIASLVDRHILLPNQAEAIDPSQIVRFFESEPGMALIEAEK
TGWVRREMPFSYGLPADETLLDFHHHSSTDEENRMKKSILHGETVLIQGIVDCLFEVGGK
RILLDYKTDRVLEHRGGIDTLAKGYEFQLDLYARALRDILGYEIDEKWLYFFDADTAVKL
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtatacctaaaccggaagggagcttttggagtgatgatcagtggaaagcaatc
tcttcgtccggagaagatatgctggtggctgcagctgccggctcagggaaaacagcagtg
cttgtcgagcgcatcattcgtaagatatcagatgagaatgcgggatttagtgtagaccgt
ctgctcgtagctacgtttaccaaggcagcggcttccgagatgcgcgagcggatccgagat
gcactggaaaccgcacttgagaaacagccagagaatgaacacttgcgtcgtcagctgagt
ctgctcggccgagcttcaatcacaacccttcattcattctgtatggagattattcgccga
tattatcagcagattccgctggaccctgggtttcgtattctgaatgaatatgaagcagag
ctgatgcgtcaagaactgctgatggatctgtttgaacaaaaatacagtgaagaaggcgaa
ggaagtaccttccgcaggctcgtggattggttcagcggtgagcgcagtgatgatgcaatg
taccggcttgtgcaaaagttgtacgatttctcgcggagtcattcatggccatcttattgg
cttgaagaaatggcagcttctttccgtgtgaattcagtggaggagctgggtcagtcgact
tgggtgaagagcattatgcgtgatgcggaacttgctcttggcggcgcggtccttttgctt
gagcaggcactgcatattgctaaggaaccggagggtcctgcagcttatgcagagacattt
aacagcgatcttgaaatggtgaacgaactactttccagggtgaaaaatggtgcttgggat
gaactatatgatgttttccatcaatcggagttcggcaagctgaaggcagtccgaaaagga
caggcagatcctagtctgcaagagagagcaaaagagcgcagagaagctgccaaaaagaca
gttacagaactaaaaacggctttatttggtcgtacacccgaacagttttttgatgaaatg
aataaagcggcacctcttatggaagagctggcatctgtcgtcaatcaatttgctcgtgta
tttacggaagagaagaaagcaagaggcgtggtcgatttcagtgatttagagcattacgcg
ctccaaatcttacgagatgctgactctacaccagaacagaccattccatcggatgcagca
ctagagtatcagcagcaatttgatgaagtattacttgatgaatatcaagatacaaataca
gtacaggaagatatcgtaagcttaatctctcgtaaagaacccggaaaccggtttatggtg
ggggatgtgaaacagagtatttatcgtttccggctagccgagccaggactcttcctggat
aagtatcgccgttatgatacggagggacaaggtgatggtctgcgaattgatctggcaagg
aatttccgcagccggcttgaagttgtaagcgccgtaaatatgctgttcagacagatcatg
aatgtaggcgtcgctgaaattgaatatgatgatgcagctgctttatcatttggcgcctct
tttcctgatgtacccgtggacgggcgatacacacccgaacttatcatgattgacagggcc
ggttcggaagtgccggaacagcctgagaatgcgggggaagatggagctgcgagtgaagtg
atagaacagcttgagatggagacagcagagctggaggcaagggtcattgctgcccgtatt
catgagatggttggcaatactggtaatccgcttcctgtctatgataagaacacgaaagag
atgagacctgcaagatatggcgatatcgtcattctcctgcgctctgctcagctgtggact
ccgcttattatggaacaactgaagcgggtaggtattcccgtaatcggtgatcaaaacaaa
ggttttttccaggcaactgaaattgagatcatgctttccttactgcaagtcgtggacaat
cctcagcaggatataccgctcgcctctgtacttcgttctccgattgtaggtctagatgaa
gaggaactcgctgtcattcggcttgcgggtaaacggctttctttttatgatgctatgcgc
agcactatcgaaaatttggagaaagaaaccggaacaaatctggagaaggaaacaagtgag
tttaatagcaccgggcacatatccagtaataaaacggatgatatagagcaattagaggca
cagatggctcttgacctcgggataaaggaagcaagcgcagcacttgaagtgatcgatacc
ctaggcgatccaaggactgatgttcatatagaagagagtcagtctgattctttactattc
aaaacaaatctgcttcgcaaactaactgcattttctgattttctagaagagtggagacat
gaggcgagaagcggcagcttgagcgaattaatctggcgtatataccgagataccggttac
ttagattgggtcagcggtttgccgggcggagtacagcgcagtcgtaatttgaaagctctc
tatgatcgtgcaaaacaatatgagaattccacagcgaatcgaggattgttccgtttcctt
acttttatttcaagactcaaggataacggaggagatctcggcgcagtaggtattgcagcg
gatacagaaggatcagtccgcattatgaccattcaccggagtaagggactcgaattcccc
atcgtctttgtcgcgggcatgtccaaaatgttcaatcaacaagacttgaatgcaccattt
atgatgcataaagagcttggatttggcccaaggtttgtggatgaggagaacagggtgagc
tatcctacgctcgcaagccttgctatccgtagacgggctcatgcggagttattagctgaa
gaaatgcgggtgctttacgttgcattgacacgtcctaaggaaaaaatgattcttatcggc
acggtaaaagatgcagctcaaaaagcaatgaactggtctcagattaaaaatcatcaggcg
cttctgcttccagaaacactgctggcttcaggacgcagttatatggactggatcggaccc
gctgtgttcaggcatccagatgcatggcatctgcgtgcgcttgcaggaatcgaagatgag
gaaacgggcagagatttaggacagcctggtttgtttgatgtacaagatgattcaagatgg
cgtatttccgtattgtctgcagaatctgtatcttcttctttggatgcttctatgaacgaa
gccgcagatgaaataaatgaagattggcagcaggtcacgcgtgcgctaatgaatctgtca
cctgttgagacgtccgtttctgaagagtctgaaaaccaaaaaaggaaaattgatgaggtg
cttagctggacttatccatatacggctagtgcccatacagcagcaagtacatcggtgacg
gagatgaaagtactccttgcgatgcaagagcatccgccgctggggctaatagaagaaaag
gttcttcatgacgaagagggcagacttgctgtaaatgatgaatttactttgcatttgcgc
agaccgaagtttatggaagaatccaggttaacggggacggagcgcggaacggtatatcat
accttaatgcagcatgtacccgctgaaccgggattaacggtcagcacagctaaggcagtc
attgctagtttggtagaccgtcatatcttgcttcctaatcaggcagaagcgattgatccc
tctcaaattgtacgttttttcgaaagcgaaccgggtatggctttgatagaagcagagaag
acgggctgggtgagaagagaaatgccgtttagctacgggcttcctgcagatgagactctg
cttgattttcatcatcactcgtctacagacgaagagaatcggatgaaaaagagtatcctc
cacggagagacagtactcattcaagggattgtagactgtctatttgaagtgggcggcaaa
cgaattttactagattacaagaccgatagagttcttgagcatcggggcggaatcgatacc
cttgcaaagggctatgagtttcagcttgatctttatgcaagagctttacgagacatcttg
gggtatgagatagatgagaaatggctttatttttttgatgcagatacggcagtaaagctc
tag
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integrated database retrieval system
