Paenibacillus polygoni: QPK24_18175
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Entry
QPK24_18175 CDS
T09587
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ppog
Paenibacillus polygoni
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_18175 (addB)
Enzymes [BR:
ppog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK24_18175 (addB)
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QPK24_18175 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WIV18309
LinkDB
All DBs
Position
complement(3793712..3797224)
Genome browser
AA seq
1170 aa
AA seq
DB search
MPLHMLIGRAGTGKSSTIIKEITEELRQNPGGKPIILIVPEQASFQTETTLIRSHEIKGS
VRAQVLDFRRLSYRVMQETNGSALIPVGSEGKKMLLYKIVQRRKDELKIFTASGGQMGFV
GHLNNLFAELKRYGEPERAIKEELENAEQLPGAGTILRHKMHDIAAIYRDFEDEVSRFHM
DEEDTLVKLGHQLPESDYVREADIWIDGFRSFTPQELAVIRQLIIHARSVTIALTLDRPY
GEGEQPQELNLFYPSASAYIKLNGIASELGESTRTTILAPEISPRFASSALAHLESGFEK
RRVMPAGKDDGGIEIRSAASSRVEVEGMLREIGRLVREENVRYRDIAVLVRNIEAYENII
SPLFQDYDIPYFLDKRRDELHHPLAEFLRSAMDIVRHRWRYEDVFRAVKTDLLLPLDGSV
SRYHMDILENYVLASGISGYRWTDGKPWRAAPSLSLEEEEGAEAQREEASRETVQMLERC
REVITSPLFAFEKRVKKAKTAKEFCSALFLLLEEAEIAKKLDARSHEALKTGKPEKAREH
RGMWGAVLELLDQVVEMMGEEKMDAELFAGILETGLSELKLGLVPPALDQVLVGSMDRSR
TGNVSHIFILGAVDGVLPQIQTEEGVLTETERAALTEYGMQLGPDINRKMQDERFLIYSA
FTQPSHKLWISYPQSDEDGKALHPSEMIRYLKRMFPELKEKTLLDEPASSDPSEEHEQYI
THSDKTMAHLISQLREWRRGQAIPAFWWDVYNWYLHQPDKQIRLERMLGSVFYENRTRSL
TKATSRKLYGNKLKTSVSRMERFAMCPFSHFASHGLKLKERQVYRLKAPDIGQLFHAALS
KMASRLKEQNRNWGALTKEECVQEAEATVDILAPQLQGEILLSSARYGYIFRKLKNIVSR
ASIILGEQSKRGNFEPLALELDFGPDKSLPPLTFELANGVVMEIVGRIDRVDVAEGEYGD
ILLRVIDYKSSQTDLKLHEVFYGLSLQMLTYLDVLLTYAEEWIGTEAHPAGVLYFHVHNP
LLTSANALAQEQAEQELLKRFKMKGLLLADRDVVAKMDNTLEKGYSSILPVAVKADGGFY
SSASVATEEQWGILLGSVRNTIQEIGSRITEGEVGIEPFRMQQETACTFCPFKSVCQFDE
GLPGNEYHLIRKPAKQQAWDLFQHEGGEEE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
ttgcctcttcatatgcttataggccgtgcaggcactggaaaaagcagtacaatcatcaag
gagattacggaagaacttcgtcagaatcctggagggaaacctatcattctgattgttcct
gaacaagcctcctttcagacagagacaacactgattcgctcccatgagattaaaggttca
gtccgggctcaggtactcgattttcgcagacttagttaccgggttatgcaggaaacgaac
ggttcggcactgattcctgttggttcagaaggtaagaaaatgctgctgtacaaaattgta
cagcggcgcaaagacgagctcaaaattttcaccgcatcaggtggtcagatggggtttgta
gggcatttaaataatctgtttgccgaactgaaacgctacggagaaccggaacgggccatc
aaagaagagcttgaaaatgcagaacagcttccaggagcaggaacgattttacgtcataaa
atgcatgatattgctgccatctatcgtgattttgaggacgaagtatctcgttttcatatg
gatgaagaggatacgcttgtgaaactcggtcatcagcttcctgagtcggattatgtgaga
gaggcagatatatggatcgacgggtttcgcagttttactccgcaggaacttgcggtgatt
cggcagctgattattcatgctagatccgtaaccattgccttaaccctggaccgtccttat
ggcgaaggggaacaaccacaagagttaaacctgttttatccgtcggcttccgcttatatc
aagctgaacgggatcgcatcagagcttggtgaatccactcgtacgacgatacttgcaccg
gagatatcgccgcgttttgcttcttctgcactggctcatttggagtcaggatttgagaag
cgaagagtgatgccagcaggcaaggatgacggcgggattgagattcgcagtgctgcaagc
agccgagttgaagtggaagggatgctaagagagataggacgacttgtacgtgaagagaat
gtccgttaccgcgatatcgcggtcctggttagaaatatagaagcgtatgaaaatataata
tcccctctcttccaagattacgatattccttattttcttgataaacgcagagatgaactt
catcatccattagcagaattcttgagatcagcaatggacattgtgcggcatcgctggcgg
tatgaggatgtattccgtgcggtcaagaccgacctgcttcttccacttgatggctcagtc
agccgttatcatatggacatacttgagaattatgtgcttgcaagcgggatctctggttat
cgttggacggatgggaaaccgtggagagccgccccaagcttatctttggaagaagaagaa
ggggcagaggctcagcgtgaagaggcaagccgtgaaacggttcagatgcttgagaggtgc
cgagaggtgattacttctccgctgtttgcttttgagaaaagagtcaaaaaagcaaaaaca
gcaaaagagttctgttcggctctatttttgcttttggaagaggcggaaattgcaaagaaa
cttgatgcacgaagtcatgaggcgctcaagacaggtaagccggaaaaagcacgagaacat
cgcgggatgtggggagcggtgcttgaacttttagatcaagtcgtagaaatgatgggcgaa
gaaaaaatggatgcagaactttttgccggcattttggaaacaggcttgtcagagctgaaa
ctcggtttagttccgcctgctttggatcaagttctcgtaggttccatggacagatcccgc
acaggaaacgtcagtcatattttcatccttggagcagttgatggggtgcttccgcaaata
caaacagaggagggcgtccttacggaaaccgaacgggcagctctcactgaatatggaatg
cagcttggcccggatataaatcggaagatgcaagatgaacgttttcttatctacagtgct
tttactcagccaagccataaattatggataagttatcctcaaagtgatgaggacggaaag
gcacttcatccttctgaaatgattcgttatttgaaacggatgtttccggagctaaaagag
aagacattgctggacgaaccagcgtcaagcgatccatcggaagaacatgagcagtatata
acacattcagataagaccatggctcatttgatcagccagcttcgggaatggcgtaggggt
caggcaatcccggcattttggtgggatgtatataattggtatctacatcagccggacaag
cagatacgactcgagcgaatgcttggatctgttttctatgagaaccggacaaggtctcta
actaaggctaccagcagaaagttatacggtaacaagctgaagacaagcgtttctcgtatg
gaacgttttgcaatgtgtccattctctcactttgcttcacatggactgaagctgaaagaa
cgtcaagtctatcgcctgaaagcaccggatatcgggcagttgttccatgcggcgctgagc
aagatggcaagccggctgaaagagcaaaatcgaaattggggcgcactgaccaaagaggaa
tgtgtacaggaagcagaagcaacggtagatatacttgcacctcagctgcaaggtgaaatt
ttactgagttcagctcggtacggatacatttttagaaagctgaaaaacattgtcagccga
gcctccatcatcttaggagaacagtcgaaacgcgggaattttgagccgctggcactcgaa
ctcgattttggaccagataaatcgctgccgccgcttacatttgaattggccaatggagtt
gtcatggagatcgtggggcggattgaccgtgtagatgtagcagaaggagaatacggagat
attttacttcgagtgattgactataaatccagtcaaacggatctgaaactacatgaagta
ttctacggattatcgctccagatgcttacgtatcttgatgtgctgttaacctatgccgaa
gagtggattggaacggaagctcatcctgcaggagtactttatttccatgtgcataatcct
ctgttgacttcagccaatgcgctggcacaagagcaggcagaacaagagcttttgaaacga
ttcaaaatgaaagggctgctgcttgccgaccgtgatgtggtggcgaagatggacaacacg
ctggaaaaaggatactcctctattttacctgtggccgttaaggcagatggaggtttctac
agcagtgcttccgtagcaaccgaagagcagtggggcatactgctgggctctgtacgaaat
acaattcaagaaattggatcaagaattaccgaaggtgaggttgggatagaacctttccga
atgcagcaggaaacggcatgtacattttgtccattcaaatccgtgtgtcagtttgacgag
ggtctgcctgggaacgaatatcatctcattcgaaagcctgctaaacagcaggcatgggat
ctatttcagcatgaagggggagaagaagaatga
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integrated database retrieval system
