Paenibacillus polygoni: QPK24_18870
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Entry
QPK24_18870 CDS
T09587
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03420
Nucleotide excision repair
ppog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QPK24_18870
03430 Mismatch repair
QPK24_18870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_18870
Enzymes [BR:
ppog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK24_18870
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QPK24_18870
MMR (mismatch excision repair)
Other MMR factors
QPK24_18870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
SLFN-g3_helicase
AAA_30
Viral_helicase1
Catalase_C
Shikimate_DH
PhoH
DEAD
ResIII
NACHT
AAA_16
nSTAND3
AAA_11
Mg_chelatase
DDAH_eukar
Motif
Other DBs
NCBI-ProteinID:
WIV18430
LinkDB
All DBs
Position
complement(3948002..3950170)
Genome browser
AA seq
722 aa
AA seq
DB search
MEETFQSAYQEEEQRLKNTMKEVDRQLAKFTSIPVYTGHDFTEQVLEAGREERRQRLSKI
VNEPYFGRLDFEEQGTNQMKPLYIGKVGVDREDYTDQPLVIDWRAPIASLFYSFTGGEGP
AEYESPEGVVEGLVYLKRNIVIRQQILERVADTYNRGSDQPAVSDEFLVYRLGENKDNKL
RDIVSTIQAEQDRIIRAARNTALIIQGVAGSGKTTVALHRLAFLLYQYKEQVSADKMIIF
APNNMFLDYISNVLPELGVGDIQQSTFSDWALQMLNLDVRLADTAETLEYWFEREGELPE
ITDEVPGRFKGSMRFMDILRSCIEQMEMTSVPDMDFSPWDGKVLPRAEIMKWFDEEYKPY
PLAKRKERVMARIHRWIEMELKKAPSAAVQKERKKKASAREKAYANKWPKYEPLTLYKHI
FKAAKGGSVIPDEIRKQIPQSVMKSTAADLKQNVVREEDLPALVYLHVLVNEISGEQRFD
HVVIDEAQDFSPFQIALLDLFVKGHSFTILGDLSQGIHAYRGVHRWEEMSQLFAEEHNDY
FALTRSYRSTMEIIEFANTILEKGVQSGITAVPVFRSGDGVRLIDYGEDSRKNALQRAMQ
HLIDKDYRTVSIVTRTLHEAKALYEELKTAGVEVNLIDDGKKQYEGGYSVLPVYLSKGLE
FDAVIVADADQDHYGNSSWDAKLLYVGCTRALHELWLMNGSERPVYMEQEAKEVVIHGWP
SE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacgtttcaaagtgcctatcaagaagaagaacagaggctaaaaaacacaatg
aaggaagtagaccgtcagctcgctaagtttacgtctatacctgtgtatacagggcatgac
tttacagagcaagtgcttgaagcaggacgagaagagcgccgtcagcgtctttccaaaatt
gtaaatgagccttatttcggacgtcttgattttgaagaacagggcacgaaccagatgaag
ccgctgtacattggcaaggttggtgtagatcgggaagattatacagaccagccgctcgta
atcgattggcgtgccccaatagcaagtcttttttattcctttacggggggagaagggcct
gcggagtatgaatctccagaaggggtcgtagaaggacttgtatatctaaaacgaaatatt
gtcattagacaacaaattctagaacgtgtggcagatacctataatcgggggagtgaccag
ccggctgtatcggatgagtttctcgtttaccggctaggtgagaataaagataataaactg
cgtgacattgtatctacgattcaggcagaacaggaccggatcattcgggcagcacgaaat
actgcgctgatcatacaaggggtggcgggaagtggtaagacgaccgttgctttgcataga
cttgcttttttactctatcagtataaggaacaagtatctgcagataaaatgatcatattc
gcaccgaataatatgttccttgattatatttctaatgtacttcctgaactgggtgtagga
gatattcagcagagtacattttcggactgggctcttcaaatgctgaaccttgatgtacgg
cttgccgatacggcagaaacactggaatattggtttgagagagaaggagaactgcctgag
ataacggatgaagtcccgggcaggtttaagggttcaatgagattcatggacatcttgcgc
agctgtatagagcagatggagatgacctcagttcctgatatggatttctctccatgggat
gggaaggtgctgccgcgggcagagattatgaaatggtttgacgaggaatataaaccttac
cctctggctaagcgtaaagaacgggtaatggcccggattcaccgctggattgagatggag
ctgaagaaggccccttctgcagcagtgcaaaaagagagaaagaaaaaagcgtcagcaaga
gaaaaagcatatgcaaataaatggccaaaatacgagccgcttactttgtacaaacatata
tttaaggcagctaaaggcggaagcgtcattccagacgaaatacgaaagcagattccgcaa
tcagtaatgaaatcgacggcagccgatctcaagcaaaacgtggtgcgagaagaggacctt
cctgcattggtttacttacacgtactcgtcaatgaaatttcaggtgaacagcgttttgat
catgtggttattgatgaagcacaagatttttcgccatttcagattgccttattggatctg
tttgtgaaaggtcactcgtttacgattcttggtgatttatcacaaggtattcatgcatac
cggggagttcaccggtgggaagagatgagccagctttttgccgaagaacataacgattac
tttgcgcttacccgcagttaccgatccaccatggagattatagagtttgcgaatacgatt
ctcgaaaaaggggtacaaagcggcattacagcggtccctgtgttccggagcggtgatggg
gttaggcttattgattatggagaggattcaagaaaaaatgcgctccaaagggcgatgcag
catctaatcgataaggattatagaacggtttccatcgtgactcgtacccttcatgaagca
aaggcattatacgaggagctgaaaaccgctggagtagaagtgaatttaattgatgatggg
aaaaaacagtacgagggcggttactctgtattgcctgtgtatttatccaaagggcttgaa
ttcgacgcagtgattgtagctgacgctgatcaggatcattatggaaacagctcttgggat
gcgaaactgctgtatgtaggatgtacgcgcgccctccacgagttgtggcttatgaatggc
agtgagcgtcccgtctacatggagcaagaagcaaaagaagtggtaatacacggctggcca
agcgaataa
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