Paenibacillus polygoni: QPK24_19000
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Entry
QPK24_19000 CDS
T09587
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QPK24_19000 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_19000 (ruvB)
Enzymes [BR:
ppog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK24_19000 (ruvB)
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QPK24_19000 (ruvB)
RecFOR pathway proteins
QPK24_19000 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_14
TIP49
AAA_22
DUF815
nSTAND3
NB-ARC
RNA_helicase
AAA_3
NTPase_1
Resolvase
AAA_18
TsaE
Sigma54_activ_2
Bac_DnaA
Rad17
AAA_24
AAA_17
AAA_28
bpMoxR
NPHP3_N
KAP_NTPase
ABC_tran
AAA_33
AAA_13
Motif
Other DBs
NCBI-ProteinID:
WIV18455
LinkDB
All DBs
Position
complement(3977815..3978819)
Genome browser
AA seq
334 aa
AA seq
DB search
MDDRIISANLMMEDQAVELSLRPRYLNEYIGQDQVKENLKVYIEAAKMRNEALDHVLLYG
PPGLGKTTLSNIIANELGVNLRTTSGPAIERPGDLAALLTNLQEGDVLFIDEIHRLNRSV
EEVLYPAMEDFALDIMIGKGPSARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVISRLE
FYTVDELTFIVSRTADLLGIEIVGDAAEEIALRSRGTPRIANRLLKRVRDFAMVRGDGII
TSSLAEEALKRLQIDPRGLDDIDYKMLKSMITSFRGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGFLQRTPRGRMVTPAAYAHLGIPMPTDR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccggattatatccgccaacctgatgatggaagatcaagcggtggagctgagt
ttgcgtccccgctatttgaatgaatatattggacaagatcaagtaaaggaaaacttaaag
gtatacattgaagctgccaaaatgagaaatgaagcactggatcatgtgctcttatacggc
ccgccaggactaggtaaaaccacgctgtcaaacattattgcgaatgaacttggtgtgaac
ctgcggacgacttctggaccggcgattgaacggcctggggatcttgcagctttgctgacc
aatcttcaagaaggggatgtcctgtttattgatgaaattcacaggcttaatcgttctgta
gaggaagtgctttaccctgcaatggaggactttgcccttgatattatgattggtaaaggt
ccaagtgcgcgttccgtgcgtctagatctcccgccttttactttgattggagctacaaca
agagcaggcctgttatctgctccgcttcgagatcggtttggagtgatcagccggcttgag
ttttacacagtggatgagttaacttttatcgtttctcgtacagccgatttacttggtatt
gaaattgttggagatgcagcagaagagattgcacttcggtcgagagggacaccgcgtatt
gcaaaccgtctgctcaaacgtgttcgggattttgccatggtacgaggggatggtatcatt
acttcttcactagcagaagaggcacttaaaagactgcaaatcgatccgcgtggacttgac
gatattgattataagatgctgaaatcgatgatcacaagcttccgcggaggaccggttggt
cttgatacgatcgcagctaccattggagaagaaagtcaaacgattgaagatgtatatgag
ccgtatcttctgcaaattggttttctgcaaagaactccgcgaggcagaatggtgactcca
gctgcttatgcgcatctaggaattccaatgcctacagatcgataa
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