Paenibacillus polygoni: QPK24_21315
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Entry
QPK24_21315 CDS
T09587
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppog
Paenibacillus polygoni
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_21315 (radA)
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QPK24_21315 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
AAA_16
Lon_C
KdpD
NTPase_1
DUF7125
AAA_24
nSTAND3
AAA_5
DAP3
Rad51
AAA
AAA_30
HypA
AAA_14
TK
ADH_zinc_N
SLFN-g3_helicase
NACHT
ATPase_2
Fer4_NifH
KTI12
divDNAB
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WIV18839
LinkDB
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Position
complement(4419427..4420794)
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AA seq
455 aa
AA seq
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MAKVKTKFYCTECGYESPKWYGKCPGCQSWNSMVEETESIVKTQGRNSSLFDSKEKPLPI
INIESDQEPRILTGIQELNRVLGGGVVPGSLILVGGDPGIGKSTLLLQTSHAMTASGLRV
LYISGEESVRQTKLRADRLEALSPDLYVLSETNMERIEEAVSQVDPHFLVIDSIQTVFLP
EITSAPGSVAQVRECTSRFMRIAKGLGIATVLVGHVTKEGSIAGPRMLEHMVDCVLYFEG
ERHHTYRLLRAVKNRFGSTNEIGIFEMGESGLREVANPSEMFLSERPLGVAGSTVVASME
GTRPMLVELQALISATQFPSPRRMATGVDYNRMALIIAVLEKRQGMFLQNQDAYLNVAGG
VKLDEPATDLAMAVSIASSFRDLPTKPYDVIFGEVGLTGEVRGVSRAEQRAKEAQKLGFK
RVIMPEKSLKGWKHPVGIELIGINTVGDALAAALD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaagtaaaaacaaagttttactgtacagaatgcggttatgaatcgccgaaatgg
tacggtaaatgtccaggttgccagtcatggaattccatggtggaggaaaccgaaagtatt
gtgaagacacaggggaggaattcttccctttttgatagtaaagaaaaaccgcttcctatc
ataaatatagaaagtgaccaagaaccgcgtattctaactggcattcaggaactgaatcga
gtacttggcggaggagtagtaccaggttcgttgattcttgttggtggggatccgggtatt
ggtaaatcaacgctcttgctccagacatctcatgccatgacagcttcagggctgcgcgta
ttgtatatttcgggtgaggaatcggttagacaaaccaaactgagagccgaccggcttgaa
gcattgtctcctgatttatatgttcttagtgaaacgaatatggaacggatcgaagaggca
gtaagtcaggttgatcctcattttctggtgattgactcaattcagactgtttttttaccg
gaaataacaagtgctcccggaagtgtggcacaggtacgagaatgtacatcacggtttatg
cggattgcgaaagggttaggcattgcaacggttctggtagggcatgttactaaagagggt
tcgattgcaggtcctcgaatgctggaacatatggtggattgtgtgctttattttgaagga
gaacgtcatcatacgtatcgtttgcttcgtgcggtaaagaatcgttttggttcgacgaat
gaaattgggattttcgagatgggagaatcgggcttaagagaagtggctaatccatcagaa
atgttcttatctgagcgaccgctaggagtggcaggttccaccgttgtagcgagtatggaa
ggaacgcgtcccatgcttgtcgaacttcaggcactgatctcggctacgcaatttccatca
cctaggcgaatggctaccggcgttgattacaaccgtatggcactgatcatcgccgtcctt
gagaagcgccaaggaatgtttctccagaatcaagatgcttatctcaatgtagctggtgga
gtgaaactggatgaacctgcaaccgatttggctatggctgtaagtattgcttccagtttt
cgcgatttgccaaccaaaccctatgatgtcatatttggagaagtaggcttgactggagaa
gtgcgcggtgtttcaagagcggaacaaagagccaaagaagcgcaaaaacttgggtttaaa
cgggtaattatgccagagaagagcttaaaggggtggaagcatcctgttggaatagaactg
atcggtattaatacggtcggagatgcactagcggctgctttagattag
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