Pollicipes pollicipes (gooseneck barnacle): 119089536
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Entry
119089536 CDS
T08250
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119089536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119089536
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119089536
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119089536
RNA polymerase I system
119089536
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
119089536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
Spt5-NGN
KOW2_Spt5
KOW
KOWx_SPT5
KOW1_SPT5
Spt5_N
KOW7_SPT5
DUF4438
Motif
Other DBs
NCBI-GeneID:
119089536
NCBI-ProteinID:
XP_037068165
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MSDSEDADDLSGSEASGPTFANRGAADDEAEEARPGEEEPSGDSEPEGEDLDKSDYDSEE
DEDEDEERRGSKKRKKKKDRFGGFILEEAEEDGDADEDEEWDAEADNYDIMANEEGEVGP
TAQEIEQRRRRNQMMWDTQNEDEIEEYYRRKYAEEGAGARHFGDGGEEMSDEITQQTLLP
GVKDPNLWMVKCRIGEERATVMKLMAKFITLSNKDEPLQIKSVVAPEGVKGYIYIEAYKQ
THVKQAIEGIGNLRMGQYTQQMVPIKEMTDVMRVIKEQMVLKRGCWVRLKRGVFKDDIAQ
VDYVDPGQSSVHLKLIPRIDYSRMRGALRDKENEVKRKRRQRPPQKLFDMEAVRSIGGEI
SQDGDFIIFEGNRYSRKGFLYKNFVMSAIQAEGVKPTLSELEKFEEQPESLDMELAHSAK
TEEGHSFTPGDNVEVVEGELINLQGTIVKIDGTKVTIMPKHEDLKDPLEFPAHELKKYFC
MGDHVKVISGRYEGDTGLIVSVEDNKAVLFSDLTMHELKVLPQDLQLCSDMATGVDSMGQ
FQYGDMVQLDPQTVGVIVRLERENLHVLNMHGKIIKVKPQAVHKKKDSRYAVALDTEQNT
IQRRDIVKVIDGPHSGRQGEIKHLFRSFAFLYSRMMLENGGIFVCRTRHLVLAGGSKGVG
TSAGGAGFMSPRLSSPAHPTGGGAAGAGGGGGIFVCRT
NT seq
2093 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacgcggatgacctgtccggctcggaggcgtccgggccgacgttc
gccaaccgcggcgcggccgacgacgaggccgaggaggcgcggcccggagaggaggagccg
tctggcgactcggagccggagggcgaggacctggacaagagtgattatgacagcgaggag
gacgaggacgaggacgaggagcggcgcggcagcaagaagcgcaagaagaagaaggaccgc
ttcggcggcttcattctggaggaggcggaggaggacggcgacgccgacgaggacgaggag
tgggacgccgaggccgacaactacgacatcatggcgaacgaggagggcgaggtggggccc
accgcgcaggagatcgagcagcggcggcggcggaaccagatgatgtgggacacgcagaac
gaggacgagatcgaggagtactaccggcgcaagtacgccgaggagggcgcgggcgcgcgc
cacttcggcgacggcggcgaggagatgtcggacgagatcacccagcagacgctgctgccc
ggcgtcaaggacccgaacctgtggatggtcaagtgccggatcggcgaggagcgcgccacc
gtcatgaagctaatggccaaattcatcacgctgtccaacaaggatgagccgctgcagatc
aagtcggtggtggcgcccgagggcgtcaagggctacatctatattgaggcctacaagcag
acacacgtcaagcaggccatcgaaggcattggcaacctgcgtatgggacagtacactcag
cagatggtgcccatcaaggagatgacggacgtgatgcgggtcatcaaggagcagatggtg
ctgaagcgcggctgctgggttcgcctgaagcgtggcgtcttcaaggacgacatcgcccag
gtggactatgtggaccccggccagagctctgtccacctcaagctcatcccgcgcattgat
tactcgcgcatgcgcggcgcgctgcgggacaaggagaacgaggtgaagcggaaacggcgc
cagcggccgccgcagaagctgttcgacatggaggccgtgcgatctatcggcggcgagatc
agccaggacggcgacttcatcatcttcgagggaaaccgctactcgcgcaaggggttcctc
tataagaacttcgtcatgagcgccattcaggctgagggcgtcaagccgacgctctccgag
ctggaaaagttcgaggagcagccggagagccttgacatggagctggcgcactcggccaag
acggaggagggccactcgttcacgcccggtgacaacgtggaggtggtagagggcgagctc
atcaacctgcagggcaccatcgtcaagatagatggcactaaggtcaccatcatgcccaaa
cacgaggatctcaaggacccgctggagtttccggctcacgaactgaagaagtatttctgc
atgggcgaccacgtgaaagtgatctcgggccgctacgagggcgacacgggcctgattgta
agcgtcgaggacaacaaggccgtgctcttctccgacctcaccatgcacgagctgaaggtg
ctaccgcaggacctgcagctctgctccgacatggccacgggcgtggacagcatgggccag
ttccagtacggcgacatggtgcaactcgatccccagacggtgggtgtgatcgtgcgcctg
gagcgcgagaacctgcatgtgctcaacatgcacggcaagatcatcaaggtgaagccacag
gcggtgcacaagaagaaggactcgcgctacgcggtggcgctcgacacggagcagaacacc
atccagcggcgcgacatcgtcaaggtcatcgacggcccgcactcgggtcgccagggcgag
atcaagcacctgttccgcagttttgcattcctctactcacgcatgatgctggagaacggc
ggcatctttgtgtgccgcacgcgccatctagtgttggccggcggctccaagggcgtgggc
accagcgcaggcggcgccgggttcatgtcaccgcgcctctcgtcgccggcgcacccgact
ggcggcggcgcggccggcgctggcggtggtggcggcatctttgtgtgccgcac
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integrated database retrieval system
