KEGG   Pollicipes pollicipes (gooseneck barnacle): 119089555
Entry
119089555         CDS       T08250                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit Rpb4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03020  RNA polymerase
ppoi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119089555
  09124 Replication and repair
   03420 Nucleotide excision repair
    119089555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppoi03021]
    119089555
   03400 DNA repair and recombination proteins [BR:ppoi03400]
    119089555
Transcription machinery [BR:ppoi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     119089555
DNA repair and recombination proteins [BR:ppoi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119089555
SSDB
Motif
Pfam: RNA_pol_Rpb4 Pes-10 Tfb4
Other DBs
NCBI-GeneID: 119089555
NCBI-ProteinID: XP_037068189
LinkDB
Position
Unknown
AA seq 138 aa
MSHVPADQPEEDAAELQFPKEFDSAETLMISEVHMLLEHRKAQNENAEEEQELSEVFMKT
LAYAERFAKFKNRETIASVRNLLAQKKLHKYELAALASLCPDNPEEAKTLIRSLEGRYEE
EELRSILDDIQTKRSFQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtcacatgtccctgctgatcagcctgaagaagatgctgcagagctccagtttccaaaa
gagtttgatagtgcagagactctgatgatttcggaggtgcacatgctgcttgagcatcga
aaggcacaaaacgagaatgctgaagaagaacaagagctatcagaagttttcatgaagacc
ttagcatatgccgaacgcttcgcgaagttcaagaacagggaaacgatcgcgtccgtccga
aatctgctagctcagaagaagttgcacaagtacgagttggcggcactggccagcttatgc
cctgacaacccggaggaagccaaaactctcatacgcagcctggagggccgctatgaggag
gaggagctgcgttccatccttgacgacatccagaccaagcgcagcttccagtactag

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