Pollicipes pollicipes (gooseneck barnacle): 119090129
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Entry
119090129 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 7-like
KO
K24738
rabconnectin-3b
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119090129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119090129
Membrane trafficking [BR:
ppoi04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119090129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
ANAPC4_WD40
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
PAC11
TRM82_WD
ASA1
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
Unpaired
Beta-prop_Aladin
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
WDR72_alpha-sol
Motif
Other DBs
NCBI-GeneID:
119090129
NCBI-ProteinID:
XP_037068819
LinkDB
All DBs
Position
Unknown
AA seq
1342 aa
AA seq
DB search
MSLGPSLIVPVVLWGRHPPTHRISCVYLTPDQRTLVTGCADGQIVTWDVHPSTLEVNPYM
MLVGHTARIVCLSNGLLHTNHRYLVSAALNGLREMCVWDLHEGQCMETVKMSFIHRQIEA
YQPTHAPDVLLFCCGEYADIAVVHPLTLEVVYWLSSKVNSNWVTSLHIFKPKAVADDIVM
AINADSVVKIWTLSRMEGKCSSDIVYENESKRIRSSGVNFLKCCSYNPRTVLVVSSSMWQ
IYDASDFSVLCSSSGDEGERWQRGEFLTADRVIVWADSGHAFIYRLPPKKLRGKAVSCIP
THEAFHSREADEPFLLCVLSSPGEQELFSPPVSIHTELHGEANIQLLVRGDCLGQLAIWR
VPRVTNNQLAQLLQQQLYRPPEMPPTVLWSIERAWQSMKPPPVGVLDQLESADGSAPLLT
SSIYLPLQEGRLVCGREDGTIIIVSATHTVMLHLLHGKHQSYDNWPIHQILSGHRGRVTA
LLFPHLSHSRYQISQLVSGGEDFSVCLWDLFSGALLHRFVVQAGIISQLHVPPETVSPRM
QQCICSVADDYSVALLSLKERKCLMLASRHLFPIATVKWRPLDDFLVVSTEDGSVSVWQM
ETGHLDRVVHGTTAQEVLSACDENMTVSISEGGMANPAVHFFRGLRHRNLSAIRHAAKRG
LQQLQNNADSLPGQHESGKPRSYALMVQGLRTNAADPDRHVLFFDVESLIVDLLTEAYSQ
MSTEALEEHGLIQLTEYQRVLELTRSESPDAQQKISEFFGRVKHKAGDVEKRLKEKDTRG
YLSRMKELKEQSEAIRDHLKERAEGSEDLKRLRTRAQGVRCRLEERIHREMEENPDAVGL
LARVKEGAETMGGIIQAKAGGAGLKGTGENRKDSDGDVEGRGKVQLGQTDNQTMEICQML
LSLVHAWGVDAEIDRLCETKLGMLRPKHPVCYGLISKHGFVSLLLPTFLGGPGSAAMAAP
LAERTVTFTRRTHWELSSALTTTHLLSVIALADTLMSMNNTSFVPEPERRKRLQKQLTRS
HSQTNQTLGKSQDGLLELQANFWAQVREGWSKIATLHCVQFPERMESSGVALKKPLVEIL
ARRWQDRCIEIRQAAQALLLAELHRLSPRNLKALVDWWAPLLPSYADQPSVVPPQHAPDE
HEPADGEPDDYVEDQMEEEAARRAAANAAEARRKQATAIILLGVIGAEFGQEVSGGRAHG
VEGFGLGPLALHTTSGSRTSTPSRCCWAMLELCCEADSMAPSMSYGLPLAAAADTARTAR
HAVALIATARPQVFVTTMAREVARYNSLQQNAQSLNVVVHHSVLMRAKPEILRVVQLLIE
KNHMELVRFLIEVRAWSAGPRG
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggggccgagcctgatcgtgccggtggtgttgtggggccggcacccgcccacc
caccggatctcgtgcgtctacctgacgcccgaccagaggacgctcgtcacaggatgcgcc
gacggccagatcgtcacctgggatgtgcacccgagcacgctggaggtgaacccctacatg
atgctggtgggccacacagctcgaatcgtctgtctcagtaacggcctgctgcacactaat
cacagatacctggtctccgccgccctgaacgggttgagagagatgtgcgtatgggatcta
cacgagggccagtgcatggagactgtgaaaatgtctttcattcaccggcagatcgaggcc
taccagccaacgcacgcgcccgacgtgctgctcttctgctgcggcgagtacgccgacatc
gccgtggtgcacccgctcacgctcgaggtcgtctactggctgtcgtccaaggtcaactcc
aactgggtcacttcgctacacatcttcaagccgaaggcggtggcagacgacatcgtcatg
gcgattaacgcggacagcgtggtgaagatctggacgctcagccgcatggagggcaagtgc
tccagcgacatcgtgtacgagaacgagagcaagcggatcaggtccagcggcgtgaacttc
ctcaagtgctgctcgtacaacccgcgcaccgtgctcgtggtgtcctccagcatgtggcag
atctacgacgcgtccgacttctcggtgctgtgctcgtcgtcgggtgacgagggcgagcgg
tggcagcgcggcgagttcctcaccgccgaccgggtcatcgtgtgggccgactccggccac
gccttcatctacaggctgccgcccaaaaaactgcgaggaaaggcagttagctgcatcccg
acgcacgaggcattccactcgcgggaggccgacgagccgttccttctatgcgtgctgtcg
tcacccggcgagcaggagctgtttagcccgcccgtcagtatacacacggagctgcacggc
gaggccaacattcagctgttggtgcgcggtgactgtctgggtcagctggccatctggcgc
gtgcctcgcgtcaccaacaaccagctggcgcagctgctgcagcagcagctgtaccggccg
ccagagatgccgccgacggtgctgtggagcatcgagagggcgtggcagtcgatgaagcct
cctcccgtcggtgtcctggaccagctggagtcggcggacggctcggcgccgctgctgacg
tccagcatctacctgccgctgcaggagggccggctggtgtgcggccgcgaagacggcacc
atcatcatcgtctcggctacgcacaccgtcatgctccacctgctgcacggcaaacaccag
agctacgacaactggccgatccaccagatcctgtcgggccaccggggccgcgtgacagct
ctgctgttcccgcacctgagccacagccggtaccagatctcccagctggtatcgggcggc
gaggacttctccgtctgcctgtgggacctgttcagcggtgctctgctgcaccgcttcgtc
gtgcaggccggcatcatctcccagctgcacgtgccaccagagaccgtgtcgccccgcatg
cagcagtgcatctgcagcgtggccgacgactactcggtggcgctgctgtcgctgaaggag
cgcaagtgcctgatgctggcctcgcgccacctcttccccatcgccacggtcaagtggcgg
cctctggacgactttctcgtggtgtcgaccgaagacgggagcgtctccgtgtggcagatg
gagacgggtcacctggaccgcgtggtgcacggcaccaccgcccaggaggtgctgtcagcc
tgcgacgagaacatgacggtctccatcagcgagggcggcatggccaacccggccgtgcac
ttcttccgcgggctgcgacatcgcaacttgtcggcaatacggcacgccgccaagcgaggc
ctgcagcagctgcagaacaacgccgacagcctgccgggccagcacgagtccggcaagccg
cgctcgtacgcgctgatggtgcagggcctgcgcaccaacgccgccgaccccgaccggcac
gtgctcttcttcgacgtcgagtcgctgatcgtggacctgctcacggaggcctacagtcag
atgtcgaccgaggcgctggaggagcacggcctcatccagctgaccgagtaccagcgcgtg
ctggagctgacccgctccgagtcgccggacgcgcagcagaagatctcagagtttttcggc
cgtgtgaagcacaaggccggtgacgtggagaagcgcctcaaggagaaggacacgcgcggg
tacctgtcgaggatgaaggagctgaaggaacagagcgaagccatcagggatcatctcaag
gagagggctgagggaagcgaggacctgaagcggctgcgcacgcgggcgcagggcgtgcgc
tgccggctcgaggagcgcattcaccgcgagatggaggagaacccggacgcagtcggcctg
ctggcgcgtgtgaaggagggcgccgagaccatgggcggcatcatccaggccaaggcggga
ggagccggcctgaagggcaccggcgagaaccgcaaggactcggatggcgacgtggagggc
cgcggcaaggtgcagcttggccagacggacaaccagaccatggagatctgccagatgctg
ctgtcgctggtgcacgcctggggtgtcgacgccgagatcgaccggctgtgcgagaccaag
ctgggcatgttgcggcccaagcaccccgtctgctacggcctcatcagcaagcacgggttt
gtgtcgctgctgctgccgacgttcctcggcggtcccggctcggcggcgatggcggcgccg
ctggccgagcgtaccgtcaccttcacgcgccgcacgcactgggagctgagcagcgcgctc
accaccacccacctgctgtccgtcatcgcgctggccgacacgctcatgtcgatgaacaac
accagcttcgtgcccgagccggagcggcgcaagcggctgcaaaagcaactgacgagatcg
catagtcagacgaaccagacgctcggaaagtcacaggacggcctgctggagctgcaggcc
aacttctgggcgcaagtccgagagggctggagcaagatcgcgacactacactgcgtccag
ttccctgagcgcatggagtcttcaggtgtagcgctcaagaagccgctcgtggaaattttg
gccaggaggtggcaggaccgatgcattgagatccggcaggcggcgcaggccctgctcctg
gcggagctgcaccgcctctcgccgcgcaacctgaaggcgctggtcgactggtgggcgccg
ctgctgccctcgtacgccgaccagccgtcggtggtgccgccgcagcacgcgcctgacgag
cacgagcccgccgacggcgagcccgacgactacgtcgaggaccagatggaggaggaggcg
gcgcggcgggcggcggccaacgcggccgaggcgcgccgcaagcaggccacggccatcatc
cttctgggcgtgatcggcgccgagttcggccaggaggtgtccggcggccgggcgcacggc
gtcgagggcttcggcctgggtccgctggcgctgcacaccaccagtgggagccgcacatcg
acgccttcgcggtgctgctgggccatgctggagctctgctgcgaggctgacagcatggcg
ccgagcatgagctacggcctgccgctggcggcggcggccgacacggcgcggacggcgcgc
cacgctgtcgccctcatcgccaccgcccggccgcaggtgttcgtcaccaccatggcgcga
gaggtggcacgctacaacagtctgcagcagaacgcgcagtctctgaacgtggtggtgcac
cactcggtgctgatgcgcgccaagccggagatcctgcgggtcgtccagctgctcatcgag
aagaaccacatggagctggtccggttcctgatcgaggtgcgcgcgtggagcgccggtccg
cgcggctga
DBGET
integrated database retrieval system
