Pollicipes pollicipes (gooseneck barnacle): 119090207
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Entry
119090207 CDS
T08250
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoi03009
]
119090207
03012 Translation factors [BR:
ppoi03012
]
119090207
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119090207
5.6.2.5 RNA 5'-3' helicase
119090207
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
Other ribosome biogenesis factors
119090207
Translation factors [BR:
ppoi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119090207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
ResIII
DEAD
nSTAND3
SLFN-g3_helicase
AAA_22
AAA_16
cobW
UvrD-helicase
UvrD_C_2
Helicase_RecD
AAA_25
NPHP3_N
AAA_28
HEM4
ABC_tran
ATPase_2
AAA
AAA_23
AAA_33
Motif
Other DBs
NCBI-GeneID:
119090207
NCBI-ProteinID:
XP_037068891
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
PPELADADGRLRLINRQLDDGQRRAVEFALRQRRLAVIHGPPGTGKTTVLIETILQHRKL
GHRVLVCAQSNAAVDNLLAALHKTGKRDMVRVGHPGRIPEGLHSYLLQGRIPKFLKKRQR
QNISRLEIMERILLSNGIVLSTLTMANEDGPLGRYGNSSFDLVVIDECSQALEAACWLAA
ARADKLVLAGDHFQLPATIKSRVAARQGLGLSLMERQVALHGDAAVRMLCTQYRMHELIQ
RWPSETIYDGRLVAAQGVRAHRLPQLPGVKDTLDTSPTLLLVDTAGCKMAETSRDRSKVN
EHEADIVARHAHALVLAGLPADQVAIITPYKQQVSLIRNALHSRQLDGHGQVEVGTVDGF
QGREKEAVLLSLVRSNQRNDVGFLKDRRRTNVAVTRARRQLFVVCDTNTVCADEFIRSLI
AHLKQCGEVRSARGLSSPPVSTAAERRPTETTSTERRGGDAKSVDSISSRISALNINSST
LAPFSQDPWAAAEPCSRPTRGSPEPLDVYVSSTVSTVASRTSLLSREQTPRRAQQRYPRA
QTPHDVDVGYADHAATTDNEASDLCCCCLIQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
ccgccggagctggccgacgccgacggcaggctgcggcttatcaaccggcagctggacgac
ggccagcggagggcggtggagttcgcgctgcggcagcggcggctagccgtcatccacggc
ccgcccggcaccggcaagaccaccgtcctgatcgagacgattctgcagcaccggaagctg
gggcatcgagtccttgtgtgcgcgcagtccaacgcggcggtggataacctgctggcggcc
ctgcataaaacagggaagcgtgacatggtgcgagttggtcatcctggacggatcccggaa
gggctgcacagctacttgctgcagggtcggatcccgaagtttttgaagaaaaggcaaaga
caaaacatatcgcggctggaaataatggaacgcatactgctgagcaatggtattgtgctg
agtacgctgacgatggctaatgaagatggcccgctgggaagatacggaaatagctcgttt
gacctggtggttatcgacgagtgctcgcaggccctggaggcggcttgctggttggcggcg
gcccgcgctgacaagctggtgctggccggcgaccacttccagctgccggccaccatcaag
agtcgggtggccgcccgccagggcctgggcctgtcgctgatggagcgccaggtagcgcta
cacggtgacgctgccgtgcgcatgctgtgcacccagtaccgcatgcacgagctgatccag
cgctggccgtcggagacaatatatgacgggcggctggtggcggcgcaaggggtgcgtgct
caccgactacctcagctgccgggcgtgaaggacacgctggacacgagccccaccctgctg
ctggtagacacggccggctgcaaaatggcggagaccagccgcgacagatcgaaagtcaac
gagcacgaggcggacatcgtggcgcgccacgctcacgcactggtgctcgccggactgccg
gccgaccaggtggccatcatcaccccctacaagcaacaggtgtcgctgattcgcaacgca
ctgcactcgcggcagctcgacgggcacggccaggtcgaggtgggcacggtggacggcttc
cagggtcgcgagaaggaggccgtgctgctgtcgctggtgcggtcgaaccagcgcaatgac
gttggtttcctgaaggacaggcgtaggaccaacgtggccgtcacgcgggcccgccgccag
ctgttcgttgtctgcgacacgaacacggtgtgcgctgacgagttcatcaggtcgctcatc
gcccacctaaagcagtgcggagaggtgcgttcggcgcgcggtctcagcagtccaccggtc
tccaccgccgccgagcgccgtccgacagaaacgacgtcaacggagcggcgcggtggcgac
gcgaagtcggtcgactcgatctcatctcgaatatctgccctgaacatcaactccagcact
ttggcgcccttctcccaagacccctgggccgcagcggagccgtgcagccggccgactcgc
ggttctccggaaccgttagacgtatacgtcagctccaccgtgtcaaccgtcgccagcagg
acgtcactgctcagcagggagcagacgccgcgcagggcccagcagagataccctcgcgcc
cagacgccgcacgacgtcgacgtgggatatgctgaccacgcggctacgactgacaacgag
gcgtcggacctgtgctgttgctgcctgatccagtga
DBGET
integrated database retrieval system
