Pollicipes pollicipes (gooseneck barnacle): 119090343
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Entry
119090343 CDS
T08250
Name
(RefSeq) chromatin assembly factor 1 p55 subunit-like
KO
K10752
histone-binding protein RBBP4
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03082
ATP-dependent chromatin remodeling
ppoi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119090343
03083 Polycomb repressive complex
119090343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119090343
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
119090343
Histone modification proteins
HAT complexes
HATB complex
119090343
HDAC complexes
Sin3A-HDAC complex
119090343
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119090343
PRC2.2
119090343
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
119090343
Heterochromatin formation proteins
Other heterochromatin formation proteins
119090343
Chromatin remodeling factors
NuRD complex
119090343
NuRF complex
119090343
NuRF complex (fruit fly)
119090343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_DCAF4
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
119090343
NCBI-ProteinID:
XP_037069066
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MTEKDGAAVTAGDNFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDV
TRPDGRDYTIHRLILGTHTSDEQNHLLIASVQLPTEDAQLDPSHYDSERGEFGGFSSVNG
RIDIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDAGGECSPDLRL
RGHQKEGYGLSWNPSVNGNLLSASDDHTICLWDINATPKENKVVDAKNIFTGHTAVVEDV
AWHLLHPTFFGSVADDQKLMIWDTRSSTTNKPSHIVDAHTAEVNCLSFNPYSEYILATGS
ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE
QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNIMQVWQMAENIYNDEE
PEAQPAELEANRD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaggacggagccgcagtaaccgcgggcgacaacttcgacgacgcagtggag
gagcgcgtcatcaatgaggagtacaagatctggaagaagaacacgccgttcctctacgac
ctggtcatgacgcacgcgctggaatggccctcgctgacggcccagtggctgccggatgtg
accaggccggacgggcgggactacaccatccaccggctgatcctgggtacgcacacgtcc
gacgagcagaaccacctgctgatcgcgtccgtgcagctgccgaccgaggacgcccagctc
gacccgtcccactacgacagcgaacggggcgagttcggcggcttcagctcagtgaacggc
cggatcgacatcgagatcaagatcaaccacgagggcgaggtgaaccgggcgcgctacatg
ccgcagaacccgtgcgtcatcgccaccaagacgcccagctcggacgtgctcgtgttcgac
tacaccaagcacccgagcaagccggacgccggcggcgagtgcagccccgacctcaggttg
cggggccaccagaaggaggggtacggcctctcctggaacccgtctgtcaacggcaacttg
ctgtcggcctcggacgaccacaccatctgcctctgggacatcaacgctactcccaaggag
aacaaggtggtggacgccaagaacatcttcaccggacacacggccgtggtggaggacgtg
gcgtggcacctgctgcacccgacgttcttcggctctgtggccgacgaccagaagctgatg
atctgggacacgcgctccagcaccaccaacaagccgtcgcacatcgtcgacgcgcatacg
gccgaggtcaactgcctctcgttcaacccttactcggagtacatcctggcgacgggctcg
gccgacaagacggtggcgctgtgggacctacgcaacctcaagctcaagctgcactcgttc
gagtcgcacaaggacgagatcttccaggtgcagtggtcgccgcacaacgagacgatcctg
gcgagcagcggcaccgaccggcgcctgcacgtctgggacctaagcaagatcggcgaggag
cagtcggccgaggacgctgaggacgggccgccggagctgctcttcatccacggcggccac
acggccaagatctccgacttctcgtggaaccccaacgagccgtgggtggtgtgctccgtc
tccgaggacaatatcatgcaggtgtggcagatggccgagaacatctacaatgacgaggag
cccgaggcgcaaccggccgaactcgaggccaaccgcgactga
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