Pollicipes pollicipes (gooseneck barnacle): 119090658
Help
Entry
119090658 CDS
T08250
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119090658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119090658
03041 Spliceosome [BR:
ppoi03041
]
119090658
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119090658
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119090658
Spliceosome [BR:
ppoi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119090658
Complex B
119090658
Complex C
U2 SnRNP specific factors
119090658
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119090658
TFTC complex
119090658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
119090658
NCBI-ProteinID:
XP_037069404
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MHLYNLTLQRATGITHAVHGNFSGSKLPEIVVSRGKTLELLRPDPNTGKVHTLLATEVFG
IVRSLMSFRLTGGTKDYVIVGSDSGRIVILEYNPGKNLFDRVHMETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAQAHLTISSPLEAHKSNTLVYHIVGVDVGFDNP
LFSCLEIDYEDADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG
GNDGPSGVLVCSENYITYKNLGDQHDIRCPIPRRRNDLDDPERGLIFVCSATHKTKSMFF
FLAQTEQGDIFKITVETDEDVVTEIKLKYFDTVPVAASMCVLKTGFLFIASEFGNHYLYQ
IANLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELESLSPILSCQIADLANEDT
PQVYSLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRKRADDDYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGEVVYFEMDTTGQLNEYTDRRTMSSDVVCMALGSVPQGEQ
RSRFLAVGLTDNTVRIISLDPSDCLAPLSMQALPAAPESLCVVEMGGTEGADGEPGLQGS
LYLNIGLQNGVLLRTVLDQVTGDLSDTRTRYLGSRPVKLFRVRMQNNEAVLAMSSRSWLN
YYYQSRFHLTPLSYQSLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQMSYPLE
YTPRKFAIHQDSGHLVIIETDHNAYTEETKQARKLQMAEEMKEAAGEEEAELADEMAQAF
LSENLPETMFGAPKAGPGMWASVIRVMEPADGRTTHLTRLEQNEAALSIALVKFASQPET
DQYVLVGVAKDYQLSPKQVDCGYIYCYKLVNEGTTLQFVHRTEVEDVPTAICPYQGRALI
SVGKLLRIYDLGKKKMLRKCENKSIPNHIVSIQALGQRVYVADVQESVFFVRYKRQENQL
ILFADDTNHRWVTATCLLDYDTVAAADKFGNVAVLRLPTGTNDDVDEDPTGNKALWDRGL
LGGASQKADVLCQFHIGETVLSLQRATLIPGGSESLVYTTISGTIGVLVPFTSHEDMDFF
QHLEMHMRSENAPLCGRDHLSFRSYYFPVKNVLDGDMCEQYNTIDMAKQKSIAEDLDRTS
SEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgtacaacctgactctgcagcgtgccaccggcatcacacacgctgtccatggc
aacttctcgggctcgaagctgcccgagatcgtggtgtctcgcggcaagactctcgagctg
ctgcgtcccgaccccaacaccggcaaggtgcacaccctgttggccaccgaggtgttcggc
atcgtgcgctcgctcatgtcgttccggctcacgggaggcaccaaagattacgtgatcgtg
ggctccgactccggccgcatcgtcatcctcgagtacaacccgggcaagaacctgttcgac
cgcgtgcacatggagacgttcggcaagagcggctgccgccgcatcgtgcccggccagtac
ctggccatcgatcccaagggccgcgccgtcatgatcggtgctatcgagaagcagaagctg
gtgtacatcctgaaccgtgatgctcaggcccacctgacgatctcatcccctctggaggcc
cacaagtccaacaccctcgtctaccatatcgtcggtgtcgacgttggatttgacaatcca
ctgttttcctgcctggaaatcgactatgaggacgccgactcggacccgaccggcgaggcg
gcgcagaagacgcagcagacgctcaccttctacgagctggacctgggcctgaaccatgtg
gtgcgcaagtactccgagccgctggaagagcacgccaacttcctgatctcggtgccgggc
ggcaacgacggtcccagcggcgtgctcgtctgctccgagaactacatcacctacaagaac
ctgggcgaccagcacgacatccgctgccccatcccacgccgccggaacgacctggacgac
ccagagcgaggccttatcttcgtctgctcggccacgcacaagaccaaatccatgttcttc
ttcctggcacaaaccgagcagggcgacatcttcaagatcacggttgagacggacgaggac
gttgtgacagagatcaagctcaaatacttcgacactgtgccggtagccgcatctatgtgc
gttttgaagactggcttcctgttcatcgcatcagagtttggcaaccactacctataccag
atcgccaacctgggcgacgacgatgacgagcccgagttcagctcggccatgccgctggag
gagggcgacacgttcttcttcgcgccgcggccgctgcgcaacctggtgctggtggacgag
ctggagtcgctgtcgccgatcctcagctgccagatcgctgacctggcgaacgaggacacg
cctcaggtgtactcgctgtgcggccgcggtccgcgctcctcgctgcgcgtgctccgccac
ggcctggaggtcagcgagatggccgtctccgagctgcccggcaacccgaacgccgtctgg
acggtgcgcaagcgggccgacgacgactacgacgcgtacatcatcgtgtcgttcgtgaac
gccacgctggtgctgtccatcggcgagacggtggaggaggtgaccgactccggcttcctg
ggcaccacgcccaccctgtcgtgctcgcagctcggcgatgacgcgctcgtccagatctac
ccggacggcatccgtcacattcgggcggacaagcgcgtcaacgagtggaaggctccgggt
aagaagacgatcgtcaaatgcgccgtcaaccagcgccaggtggtgatcgcgctaaccggt
ggcgaggtggtctacttcgagatggacacgacgggccagctgaacgagtacacggaccgg
cggacgatgtcgtcggacgtggtctgcatggcgctgggctcggtgccgcagggcgagcag
cgctcgcgcttcctggccgtcggcctcaccgacaacacggtccgcatcatctcgctggac
cccagtgactgtctggcgccgctcagcatgcaggcgctgccggcggcgcccgagtcgctc
tgcgtggtcgagatgggcggcacggagggcgccgacggcgagcccggcctgcagggctct
ctctacctcaacattggactccagaacggcgtgctgctgcgcaccgtgctggatcaggtg
actggtgacctgtcggacacgcgcactcggtacctcggctcccggcccgttaaactcttc
cgcgtgcgcatgcagaacaacgaggcggtgctggccatgtccagccggtcgtggctcaac
tactactaccagagccggttccacttgacgccgctgtcgtaccagtcactggagtttgcc
agcggcttcgcctccgagcagtgtcccgagggcatcgtggccatcagcaccaacacgctg
cgcattctggcgctggagaagctcggcgccgtcttcaaccagatgtcgtacccgctcgag
tacacgccgcgcaagttcgccatccaccaggacagcggccacctggtcatcatcgagacc
gaccacaacgcctacaccgaggagacgaaacaggcgcgcaagctgcagatggccgaggag
atgaaggaggcggccggtgaggaggaggcggagctggccgacgagatggcgcaggccttc
ctctcggagaatctgcccgagacgatgttcggcgcgcccaaggccgggcccggcatgtgg
gcttcggtcatccgcgtcatggagccggccgacggccgcaccacccacctgacccggctc
gagcagaacgaggccgcgctcagcatcgcgctcgtcaagttcgccagtcagccggagacg
gaccagtacgtgttggtcggtgtggccaaggactaccagctcagccccaaacaggtcgac
tgcggctacatctactgctacaagctggtgaacgagggcacgacgctgcagttcgtgcac
cggaccgaggtggaagacgtgccaacggccatctgcccgtatcagggccgtgcgctcatc
agcgtcggcaaactgctgcgcatctacgacctgggcaagaaaaagatgctcagaaaatgc
gaaaacaagagcatcccgaaccacatcgtcagcatccaggcgctgggtcagcgcgtgtac
gtggcggacgtgcaggagtctgtgtttttcgtgcgctacaagcgccaggaaaaccagctg
atcctgttcgccgacgacacgaaccaccgctgggtgacggccacctgtctgctcgactac
gacacggtggcggcggcggacaagttcgggaacgtggccgtgctgcgtctgcccaccggc
accaacgacgacgtggacgaggacccgacgggcaacaaggcgctgtgggaccgcggtctg
ctgggcggtgcctcgcaaaaagccgacgtcctctgccagttccacatcggcgagacggtg
ctctcgctgcagagggcgacgctgatcccgggcggcagcgagtctctcgtgtacaccacc
atctcaggcacgatcggcgtactggtgccgttcacttcgcacgaggacatggacttcttc
cagcacctggagatgcacatgcgctcggagaacgcgccgctgtgcggccgcgaccacctc
tcattccgcagctactacttccccgtcaagaacgtgctggacggcgacatgtgcgaacag
tacaacacaatcgacatggccaagcagaagtcgatcgccgaagacctggaccgcacctcg
agcgaagtgtccaagaagcttgaggacatccggacccgctacgctttctaa
DBGET
integrated database retrieval system
