Pollicipes pollicipes (gooseneck barnacle): 119090920
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Entry
119090920 CDS
T08250
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119090920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119090920
03009 Ribosome biogenesis [BR:
ppoi03009
]
119090920
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119090920
Spliceosome [BR:
ppoi03041
]
Complex A
U1 snRNP components
U1 related factors
119090920
Complex B
119090920
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
Pre-60S particles
Helicases
119090920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Clathrin
Cas3-like_C_2
DUF7136
Motif
Other DBs
NCBI-GeneID:
119090920
NCBI-ProteinID:
XP_037069542
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MYGGSSFGSSFGGGFGGGFGGGRMKSSQPGGNLRRPDWATIKLTPIQKDFYQPLPQVLAR
GQSEIEAYRISKEVTVRGSVVPAPMLEFSDCTMPDYILNTIKKNGFTNPTPIQAQGWPIA
LSGKDMVGIAQTGSGKTLGYMLPAIIHINHQDYLRPGDGPIALVLAPTRELAQQISEVAN
EFGRSSKLRHTCVYGGAPKGGQLRDLERGVEIVIATPGRLIDFLEMGKTNLRRTTYLVLD
EADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRRLAEEFLVDYTQLNVGSLDLS
ANHNILQIVDVCESHEKFQKLFRLLEEIMAEKENKTIIFTETKRGSDELTRQMRREGWPG
MCIHGDKTQQERDWVLREFRSGRSPILVATDVAARGLDVTDVKFVINFDYPNNSEDYIHR
IGRTGRSNNSGTAYTFFTPENGAKARDLVSVLREANQVVNPKLLELENSSRGYGGRSRYG
GGGRRSGGGGRGFGGGRW
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtacggaggcagcagcttcggcagtagcttcggcggcggcttcggcggcggcttcggc
ggaggccgcatgaagagcagccagcccggcggcaaccttcgccggccggactgggccacc
atcaagctgacgcccatccagaaggacttctaccagccgctgccgcaggtgctggcccgc
ggacagtccgagatcgaggcgtaccgcatcagcaaggaggtgacggtgcgcggctcggtg
gtgccggcgcccatgctggagttcagtgactgcaccatgcctgactacatcctcaacact
atcaagaagaacggcttcacgaacccgacaccaatccaggctcagggctggccgatcgcc
ctctctggcaaggacatggtgggcatcgcccagacaggctcgggcaagacgctcggctac
atgctgccagccatcatccacatcaaccaccaggactacctgcggccgggcgacggcccc
atcgcgctggtgctggcgcccacccgcgagctggcccagcagatctccgaggtggctaac
gagttcggccgcagctccaagctgcgccacacgtgcgtctacggcggcgcgcccaagggc
ggccagctgcgtgacctggagcgcggcgtcgagatcgtgatcgccacgcccggccggctg
atcgacttcctggagatgggcaagaccaacctgcggcgcaccacctacctggtgctggac
gaggccgaccgcatgctcgacatgggcttcgagccgcagatccgcaagatcgtggagcag
atccggcccgaccggcagacgctcatgtggagcgccacctggcccaaggaggtgcgccgg
ctggccgaggagttcctggtggactacacccagctcaacgtgggctcgctcgacctctcc
gccaaccacaacatcctgcagatcgtggacgtctgcgagagccacgagaaattccagaag
ttgttccgcctactggaggagatcatggctgagaaggagaacaagaccatcatcttcacg
gagacgaagcgcggctctgatgagctgacgcgccagatgcggcgcgagggctggcctggc
atgtgcatccacggcgacaagacgcagcaggagcgcgactgggtgctgcgcgagttccgc
agcggccgctcccccatcctggtggccacggacgtggccgcccgtgggctcgacgtgact
gacgtcaagttcgtcatcaacttcgactacccgaacaactctgaggactacatccaccgc
atcgggcgcaccgggcgcagcaacaacagcggcacggcctacaccttcttcacgcccgag
aacggcgccaaggcgcgggacctggtgtcggtgctgcgcgaggcgaaccaggtggtgaac
cccaagctgctggagctggagaactcgtcccgcggctacggcggacgcagccggtacggc
ggcggcggacggcggtcgggcggcggcggccgcggcttcggcggcggacggtggtga
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