Pollicipes pollicipes (gooseneck barnacle): 119090981
Help
Entry
119090981 CDS
T08250
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04140
Autophagy - animal
ppoi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119090981
04148 Efferocytosis
119090981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119090981
Membrane trafficking [BR:
ppoi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119090981
Hops complex
119090981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
zf-C3HC4_2
zf-RING_UBOX
Clathrin
zf-RING_5
zf-C3HC4
zf-RING_Vps41
zf-RING_2
zf_RING_Vps8
zf-RING_11
TPR_IF140-IFT172
zf_RING_Vps8_fungal
zf-rbx1
zf-C3H2C3
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
119090981
NCBI-ProteinID:
XP_037069600
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MAGLLEQYERSSQAPAPGGMAAGAAGRQTVGPIFTKQKVNFTPTSPTTHLVVANNQLVIA
MASKTLLRIDLLNPETPQEVDLARDTAGSRLQHLFLDPSGAHLLVATVPREGDLSNAGLL
YIGGRAAKPRPVSQLRGQLVTAVGWSHTLATPASTGPLLAGNSQGVVTELELSGDERLFS
RLELYVKQVLEVGEQRPSAAITGLEHHRVPGTDRYLALVATPGRLYQFVGSVASHDARPL
LAGIFTTGGQVSERFLEIPSSLAFSRLAFFYPKVGGPPDRFAWMTEPGILCGELDTSGAD
TILGETKLIPQPVEEPAPAGSGQRQPPRALALTQFHVLALHAARVRATCVLDQRHVFEDL
ASEAHGPLVALCRDPVRGTLWSAAERAVYKYRVVDETRDVWQVLVQQGQYELARRHCQDN
PTVVDKILTHQAEHCFSLGDYEASARLFADTQRRLEEVALKFVERREYEALRQFLMTRLS
ALSAGERLQAALLVFWALELFLTQLGRLKDADDPARHQLRQQMMQFLTSHEALTHVQRAR
KAVYDLMARHGDAAAVPELAQRLQDWHTVVRHHLRSGHITRALETLRAHPDPELLYQLVP
RLIQAEPTLTVDLVIGQGRKLRPATLMPRLILADTSEEQGLQILRYLQFCIDTLGSADCV
AHNYLVTLYVRYRPDRLMDYLRSQGSDRHCVRYSPGHVLRQCWTRQPAAAVHVLTVVGRY
EEAVELALQHDVTLAKQVANLPEEDDTLRKRLWLVIAKHTIQCDRSVQRTMQFLSECPLL
RIEDVLPFFPDFVTIDDFKEAICDSLQSYNEHIGGLRQEMEEATRATDVLRQEIADFRQG
FVTVQASDVCQVCRHQLLTRPLYVFPCGHRFHQDCLTEEVLPHLTPAQRQTAADLQHKLS
TLPEDEVAAAAAGAAQVSPRVVAREELDQLVAAECLYCGDYLVR
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtctgctggagcagtatgagcggtcctcgcaggcgccggcgcccggcggcatg
gctgccggagcggcgggtcgtcagacagtggggcccatcttcaccaagcagaaggtgaac
ttcacgcccacctcgcccaccacccatctcgtggtggccaacaaccagctggtgatcgcc
atggccagcaaaactctgttgaggatcgacctgctcaacccggagacgccgcaggaggtg
gacctggcgcgcgacacggccggcagtcggctgcagcacctgttcctggacccgtccggg
gcgcacctgctggtggccacggtgccgcgcgagggcgacctctccaacgccggcctgctc
tacatcggcggccgcgccgccaaaccgcgcccggtgagccagctgcggggccagctggtg
acggcagtgggctggagccacacgctggccacgccggcctccacaggaccgctgctggcc
ggcaactcgcagggcgtcgtcaccgaactggagctgagcggtgacgagcggctgttctcg
cggctcgagctctacgtcaaacaggtgctggaggtgggcgagcagcgcccctcggccgct
atcaccggtctggagcaccaccgggtgcccggcacggaccgctacctggctctggtggcc
acgcccggccggctgtaccagtttgtgggctccgtggccagccacgacgcgcggccgctg
ctcgccggcatcttcaccaccggcggccaggtgtcagagcggttcctggagatccccagc
tctctggcgttctcccggctggccttcttctacccgaaggtgggcgggccgccggaccgg
ttcgcctggatgaccgagcccggcatactctgcggagagctggacacgagcggcgccgac
acgatcctgggggagaccaagctgatcccgcagccggtggaggagccggcgccggccggc
tccggccagcggcagccgccgcgagccctcgccctcacccagttccacgtgctggcgctg
cacgcggcgcgcgtgcgcgccacgtgcgtgctggaccagcgccacgtgttcgaggacctg
gccagcgaggcccacggaccactggtggccctctgccgtgatccggtgcgcggcacgctg
tggagcgccgccgagagggccgtctacaagtaccgggtggtggacgagacgcgggacgtg
tggcaggtgctggtacagcagggccagtacgagctggcgcggcgccactgccaggataac
ccgacagtggtggacaagatcctcacccaccaggccgagcactgcttctcactgggagat
tacgaggcgagcgctcggctgttcgccgacacccagcgccgtctggaggaggtggctctg
aagtttgtcgagcgccgcgagtacgaggccctccgccagttcctcatgactcgtctgtcg
gcgctgtcggccggcgagcggctgcaggcggcgctgctcgtgttctgggcgctggagctc
ttcctgacgcagctgggccgtctgaaggacgccgatgacccggcccggcaccagctgcgc
cagcagatgatgcagttcctcacctcgcacgaggcgctgacgcacgtgcagcgggcccgg
aaggcggtgtatgacctgatggcgcgccacggcgacgcggcggcggtgccggagctggcg
cagcggctccaggactggcataccgtggttcgccaccacctgcgcagcggccacatcacc
agagcgctggagacgctgcgggcgcacccggacccggagctgctttaccagctggtgccg
cggctgatccaggccgagcccacgctcaccgtcgacctggtgatcggccagggccgcaag
ctgcgcccggccacgctcatgccgcgcctcatcctggccgacacgtccgaggagcagggt
ctgcagattctgcgctacctgcagttctgtatcgacacgttgggcagcgccgactgcgtg
gcgcacaactacctggtcacgctgtacgtgcgctaccggcccgaccggctgatggactac
ctgcgcagccagggctccgaccgtcactgcgtgcgctactcgccgggtcacgtgttgcgc
cagtgctggacgcgccagccggccgccgccgtgcacgtgctgaccgtggtcggccggtac
gaggaggccgtcgagctcgccctccagcatgacgtcacactcgccaaacaggtggctaac
ctgccggaggaggacgacacactgaggaagcggctctggctggtgatcgccaagcacacg
atccagtgcgaccggagcgtccagcgcaccatgcagttcctctcggagtgtccgctgctg
aggatcgaggacgtgctgcccttcttccctgattttgtcaccatcgacgacttcaaggag
gccatctgcgactcgctgcagtcgtacaacgagcacatcggcggcctgcgccaggagatg
gaggaggccacgcgcgccacggacgtgctgcggcaggagatcgccgacttcaggcagggc
ttcgtcactgtgcaggcgtcggacgtgtgccaggtgtgccggcaccagctgctgacccgg
ccgctgtacgtattcccctgcggccaccggttccaccaggactgcctgacggaggaggtc
ttacctcacctgacgccggcgcagcgccagacagccgccgacctacagcacaagctgagc
acgctgcccgaggacgaggtggcggcggcggcggcgggcgcggcccaggtcagcccgcgg
gtggtcgcccgggaggagctggaccagctggtggccgccgagtgtctctactgcggagac
tatctggtcaggtga
DBGET
integrated database retrieval system
