Pollicipes pollicipes (gooseneck barnacle): 119091724
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Entry
119091724 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit alpha-like
KO
K05236
coatomer subunit alpha
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119091724
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppoi04147
]
119091724
Membrane trafficking [BR:
ppoi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119091724
Exosome [BR:
ppoi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119091724
Exosomal proteins of bladder cancer cells
119091724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
119091724
NCBI-ProteinID:
XP_037070462
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHSGVVQLWDYRMCTLLEKFDEHDGPVRGIAFH
MQQPLFVSGGDDYKIKVWNYKQKRCVFTLLGHLDYIRTTEFHHEYPWIISASDDQTIRIW
NWQRRSCICILTGHNHYVMCARFHPSEDLVVSASLDQTVRVWDISGLRQKHVAPGPSGMD
DHAKAGHSPDLFGQADAVVKHVLEGHDRGVNWATFHPTLPLIVSGADDRQIKFWRMNDTK
AWEVDTCRGHYNNVSCVLFHPRQELILSNSEDKSIRVWDMSKRTCLHTFRREHDRFWVMG
AHPSLNVFAAGHDSGMIIFKLERERPAHAISGNMLFYVKDKFLRRLDFTTNKDVAVMQIR
LLGRTKPYSLSYNPAENAVLICSRPSNTENSTYDLYQVPKQTDPQNPETPEGKRAAGLSA
IWVARNRFAVLDRSHQITIKNLKNEVQKKVQAPACDEIFYAGTGMLLLRDTDAVTMFDVQ
QKRSTASVKINKCRYVVWSPDMSHVALLAKHAVLVCNRKLETLCSLQESTRVKSGTWDDS
GVFIYTTSNHIKYTLTNGDNGIIRTLHVPIYLTKIKGSQVHCLDREVRARIMNVDVTEFR
FKLALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFGLALECGNV
DVALEAARALDDKDCWDKLGEAALMQGNHQVVEMCYQRTKNFDRLSFLYLITGNLEKLRK
MMKIAEIRKDTSGQYQSALYLGDVPERVRILRACGQTQLAYLTAATHGLEAETAELAAAL
GEDAELPQPEPQAQLLQPPAPLHQSDDNWPLLTVSKTFFEGAITKPGRAPTAVASAMVAD
APDEGAADGWGADADLGLDEEGDGEPGLDGAAGAEGGGWDVDDDLELPADLEVPAAAGGG
ADDDGYFVPPTKGTPQTQVWTRNSQLPVDHVLAGSFESAFRLLHDQLGVVAFAPYRQLFL
QAFSQARTCFPAAASSPPLFGHPHRNWKEAGMKAGMPAVGIRLTDLVNRLQTCYQLTTAG
KFAEAVERFRAILLSVPLLAVTTKQEIAEATQLMEICREYVLGLSMEIQRKEMPKATLEE
QKRLCEMAAYFTHCNIQPVHQVLTLRTALNLFFKLKNYRTAASFARRLLELGPRPEVAQQ
TRKVLQVCDKTPTDEHQLLYDEHNPFALCAATYRPIYRGKPDAKCPLCSAAYTPDYKGSL
CKVCAVAEVGRESIGLRICPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagtttgagacaaagtctgcgagggttaagggcctgtcgtttcatccaaag
cgaccatgggtcctagcgagcttgcacagtggcgtggttcagctatgggactaccggatg
tgcactctgctggagaagttcgacgagcacgacggcccggtgcgcggcatcgcgttccac
atgcagcagccgctgttcgtgtccggcggcgacgactacaagatcaaggtgtggaactac
aaacagaagcggtgcgtgttcacgctgcttggtcacctggactacatccgcaccaccgag
ttccaccacgagtacccctggatcatctcggcctccgacgaccagaccatccgcatctgg
aactggcagcgccgcagctgcatctgcattctgacggggcacaaccactacgtgatgtgc
gctcgcttccacccgtccgaggacctggtggtgtccgcgtcgctggaccagaccgtgcgc
gtctgggacatcagcggtctgcgccagaagcacgtggcgcccggcccgtccggcatggac
gatcacgccaaggcggggcactcgcccgacctgttcggccaggctgacgccgtggtcaag
cacgtgctggagggccacgaccgcggcgtcaactgggccacgttccacccgacgctgccg
ctgatcgtgtccggcgccgacgaccgacagatcaagttctggcgcatgaacgacaccaag
gcgtgggaggtggacacgtgccgcggacactacaacaacgtctcgtgcgtgctcttccac
ccgcgccaggagctgatcctctccaactctgaggacaagtccattcgcgtctgggacatg
agcaagcgcacctgcctgcacacgttccggcgcgagcacgaccgcttctgggtgatgggt
gcgcatccttcgctcaacgtgttcgccgctggccacgactcgggcatgatcatcttcaag
ctggagcgagagcggccggcgcatgccatcagcggcaacatgcttttctacgtcaaggac
aagttcctgcgccggctcgacttcaccaccaacaaggacgtggccgtgatgcaaatccgg
cttctgggccgcaccaagccatacagcctctcctacaacccggcggagaacgcggtgctc
atctgctcgcgcccctccaacacggagaactccacgtacgacctgtaccaggtgcccaag
cagacggacccgcagaacccggagacgcccgagggcaagcgggccgccggcctcagcgcc
atctgggtggcccgcaaccggttcgccgtgctggaccgcagccaccagatcaccataaag
aacctgaagaacgaggtgcagaagaaggtgcaggcgccggcctgcgatgagatcttctac
gcgggcacgggcatgctgctgctacgcgacacggacgccgtcaccatgttcgacgtccag
cagaagcgatccacggccagcgtgaagatcaacaagtgccgctacgtggtctggtcgcca
gacatgtcgcacgtggccctgctggccaagcacgccgtgctggtctgcaaccgcaagctg
gagacgctctgctcgctgcaggagagcacgcgcgtcaagtcgggcacgtgggatgacagc
ggcgtcttcatctacaccacctccaaccacatcaagtacacgctcaccaacggcgacaac
ggcattatccgcacgctgcacgtgcccatctacctgaccaagatcaagggcagccaggtg
cactgtctggaccgcgaggtgcgcgcgcgcatcatgaacgtcgacgtcaccgagttccgc
ttcaagctggcgctggtcaaccgcaagtatgacgaggttctgcacatggtccgcaacgcc
aagctggtcggccagtccatcatcgcctacctgcagaagaagggctatccggaggtcgcc
ctgcacttcgtgaaagacgagaagacccggttcggtctggcgctggagtgcggcaacgtg
gacgtggccctggaggcggcgcgggccctcgacgacaaggactgctgggacaagctgggc
gaggcggcgctgatgcagggcaatcaccaggtggtggagatgtgctaccagcgcaccaag
aacttcgaccggctcagcttcctgtacctcatcaccggcaacctggagaagctgcgcaag
atgatgaagatcgccgagatccgcaaggacacgtccggccagtaccagagcgccctgtac
ctgggcgacgtgccggagcgtgtgcgcatcctgcgcgcgtgcggccagacgcagctggcc
tacctgacggccgccacgcacggcctggaggcggagacggccgagctggcggcggccctg
ggcgaggacgccgagctgccgcagccggagccgcaggcgcagctgctccagccgccggcg
ccgcttcaccagagcgacgacaactggccgctgctgaccgtctcgaagacattcttcgag
ggcgccatcacgaagccgggccgcgcgccgacggccgtggcgtcggcgatggtggcggac
gcgccggacgaaggcgccgccgacggctggggcgcggacgccgacctcggcctcgacgag
gagggcgacggcgagccgggcctggacggcgccgccggcgccgagggcggcggctgggac
gtggatgacgacctcgagctgccggccgacctggaggtgccggccgccgccggcggcggc
gccgacgacgacggctactttgtgccgcccaccaagggcacgccgcaaacgcaggtgtgg
acgcgcaactcgcagctgccggtggatcacgtgctggccggctcgttcgagtcggccttc
cggctgctgcacgaccagctgggcgtggtggcgttcgcgccctaccgccagctgttcctg
caggcgttcagccaggcgcgcacctgcttcccggcggcggccagctcaccgcccctcttc
ggccacccgcaccgcaactggaaggaggccggcatgaaggccggcatgccggccgtcggc
attcgactgaccgacctcgtcaaccgacttcagacgtgctaccaactgacgacggccggc
aagttcgccgaggcagtggagcggttccgcgccatcctgctgtctgtgccgctgctggcc
gtcaccacaaagcaggagatcgccgaggccactcagctgatggagatctgccgcgaatat
gtgctcgggctgtcgatggagatccagcgcaaggagatgcccaaggcgacgctggaggag
cagaagcggctctgcgagatggccgcctacttcactcactgcaacatccagccggtgcac
caggtgctgacgctgcgcacggccctcaacctgttcttcaagctgaagaactaccgcacg
gcggccagcttcgcgcggcgcctgctggagctggggccgcggcccgaggtggcccagcag
acgcgcaaagtgctccaggtgtgcgacaagacgccgacggacgagcaccagctgctgtac
gacgagcacaacccgttcgcgttgtgcgccgccacctaccggcccatctaccggggcaaa
ccggacgccaagtgcccgctgtgctcggccgcgtacacgcccgactacaagggctcgctc
tgcaaggtgtgcgccgtggcggaggtgggccgcgagagcattggcctgcgcatctgcccg
ctgcagttccgatag
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integrated database retrieval system
