KEGG   Pollicipes pollicipes (gooseneck barnacle): 119091829
Entry
119091829         CDS       T08250                                 
Name
(RefSeq) DNA excision repair protein ERCC-8-like
  KO
K10570  DNA excision repair protein ERCC-8
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03420  Nucleotide excision repair
ppoi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119091829
  09124 Replication and repair
   03420 Nucleotide excision repair
    119091829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppoi04121]
    119091829
   03400 DNA repair and recombination proteins [BR:ppoi03400]
    119091829
Ubiquitin system [BR:ppoi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119091829
DNA repair and recombination proteins [BR:ppoi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119091829
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_Aladin EIF3I Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD_LRWD1 Beta-prop_DCAF12 Beta-prop_RIG_1st Beta-prop_IFT122_1st WD40_RFWD3 WDR54 Beta-prop_WDR11_2nd Beta-prop_DCAF4 Cytochrom_D1
Other DBs
NCBI-GeneID: 119091829
NCBI-ProteinID: XP_037070618
LinkDB
Position
Unknown
AA seq 285 aa
MIQRTVESLDDRQFVFQVWDTNTMTKSETFRFDEKLICHAMSPVATAHSLIAVGGESATV
TLCDLRSGSNTHQLRGHAAASVDTCRWSPAHHHLLATGGRDKRILFWDVRYAKSQLASLG
RHHPRENVAHRAPVAGLRFLADGRHLVSVGRDGACAVWDLLTGRACWLAIPRLRLSNTAG
LGYQLAVTADGRRQLAFLPDGTQLATCDLGGGRLCQRLDGHLRPVLACEYDRRCGRLLTA
GADNNVLVWSAARTSAHEQARRPDATGRASNGAGDVMQDEWSDDD
NT seq 858 nt   +upstreamnt  +downstreamnt
atgatacaacgaactgtagaatcgttggatgacagacagtttgtgtttcaggtgtgggac
actaataccatgacgaaaagcgagacatttcgtttcgatgagaaactcatttgtcatgca
atgtcaccagttgccacggcacacagtctcattgctgtgggcggcgaaagtgcgaccgtc
acgctctgcgacctgaggtcaggctccaacacgcaccagctgcggggtcacgcggccgcc
tcggtcgacacgtgccgctggtctcctgcccatcaccacctgctggccaccggcggacgc
gacaaacggattctgttctgggacgtgcgctacgccaagagccagctggcgtcgctgggc
cggcatcacccgcgcgagaacgtggcgcaccgcgcgcccgtggccggtctgcgcttccta
gccgacggccgccacctggtgtcggtggggcgcgacggcgcctgcgccgtctgggacctg
ctgacgggccgcgcgtgctggctcgccatcccacgtctgcggctcagcaacaccgccggc
ctgggctaccagctggcggtgacggccgacggccgccgccagctggcctttctgccggac
ggcacccagctggccacctgtgacctgggcggcggccggctgtgtcagaggctcgacggt
cacctgcggcccgtgctcgcgtgcgagtacgatcgccgctgcggccggctgctgacggcc
ggcgctgacaataacgtgctggtgtggagcgccgccaggacgagcgcgcacgagcaggcg
cggcggccggacgccaccggccgggcgtcgaacggggccggcgatgtgatgcaggatgag
tggagcgatgacgactag

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