Pollicipes pollicipes (gooseneck barnacle): 119091942
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Entry
119091942 CDS
T08250
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03022
Basal transcription factors
ppoi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119091942
09124 Replication and repair
03420 Nucleotide excision repair
119091942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119091942
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119091942
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119091942
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119091942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
119091942
NCBI-ProteinID:
XP_037070765
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MTTTEDILLQANNVRHKKSDGTLFLMSERIGWLMGSKDTFSVSYKYSDIKMQKISPEGKA
KIQLQVVLHDGGASTFHFNAPDGEEAQKRDRDAVKELLQTLLPKFKRKVNKELEEKERLL
RENPALLQLYQDLVITRIATADEFWEQHAAEFINKTSCKQDVGVSGAFLADIKPQTDGCN
GLKYNLNVDTINSIYKTYPAVRRKFFEYVPGRMSESEFWTRFFQSHYFHRDRINLSSKDL
FTDCAKQDEKVIQGELEKDLEDPMLDLRRMTDTTVGDGYGTSTDTPSSSQTNTANISMIR
RFNQHSMNVLKASLAAEATAQPAGQPQQNGHASGGEPSAPAGPDLAAKKARLEERTCYAD
LEAPVPAAGQALSLTKVERYLSGPTPDAPRPAAEPPSADAAGRLCQGVRRWQPFAARVLD
PQAAVSVLGDLSPGGALMKTSHKERNAAADLPDQVKTELAAIYRSAGELLRHFWTCFPVS
TPALEEKVAKVQDTLHKFHQLKIRQFEDGLCRQAGLGPDVTAHLNQMLAAAYAKYEQWRS
VRRLQR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaactgaagatatcctgctgcaagcaaataatgtcagacacaaaaagagtgat
ggtacactctttctcatgagtgaacgcattggatggctaatgggatcaaaagacaccttt
tctgtcagctacaagtattctgacattaagatgcagaagatcagcccagagggcaaggcc
aagatccagctgcaggtggtgctgcatgatgggggtgcctccaccttccacttcaacgct
cctgacggcgaggaggcgcagaagcgcgaccgcgacgccgtcaaggagctgctgcagacg
ctgctgcccaagttcaagcgcaaggtcaacaaggagctcgaggagaaggagaggctgctg
cgggagaacccggccctgctgcagctgtaccaggatctcgtcatcacgcgcatcgccaca
gccgacgagttttgggagcagcacgcggccgagtttatcaacaagaccagctgtaaacaa
gacgtcggcgtgtcgggtgcctttctggcggacatcaagccccagacggacggttgcaat
ggtctgaagtacaatctcaacgtagacaccatcaactccatctacaagacgtacccggcc
gtgcggagaaagtttttcgagtacgtgccggggcgcatgtcggagtcggagttttggacg
aggtttttccagtcgcactacttccaccgagaccggatcaacctgagcagcaaggacctg
ttcaccgactgcgccaagcaggacgaaaaggtgatacaaggcgagctggagaaggacctg
gaggacccgatgctggatctgcggcgcatgaccgacaccacggtcggcgacggctacggc
acctccacggacacgccgtccagctcgcagaccaacacggccaacatcagcatgatccga
cggttcaaccagcactccatgaacgtgctgaaggcgagcctggcggccgaggcgacggct
cagccagcgggccagccgcagcagaacggccacgccagcggcggcgagccgagcgcgccg
gccggccccgacctggccgccaagaaggcacggctggaggaacgcacctgctacgcggac
ctggaggcgccggtgccggccgccggccaggcgctgagccttaccaaggtggagcgctac
ctgagcggaccgaccccggacgcgccgcggccggccgccgagccgccgtcagcagacgcc
gccggccgcctctgtcagggcgtgcgccgctggcagccattcgccgcccgggtgctggac
ccgcaggcggcggtcagcgtgctgggcgacctgtcgccaggaggcgccctcatgaagacc
tctcacaaggagcgcaacgctgccgccgacctaccggaccaggtaaaaacagagctggct
gccatctatcggtcagcgggggaactgctacgccacttttggacctgcttccctgtatca
acaccagcgttggaggagaaggttgccaaagtgcaggatacgctccacaaattccatcaa
ctcaaaattcggcagtttgaggacggcctgtgtcgacaggcgggcctggggccggacgtg
acggcccacctcaaccagatgttggccgccgcctacgccaagtatgagcagtggcgctca
gtgcgccggctgcagcggtag
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