Pollicipes pollicipes (gooseneck barnacle): 119092687
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Entry
119092687 CDS
T08250
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119092687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119092687
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119092687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
TFIIA
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
119092687
NCBI-ProteinID:
XP_037071548
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MAFGGFGGFGAASSAPSGSLFGSASTPSVAGFGTTTTTKSVTFGQPTASTGFGGFGTPAA
AVPTAGLSFGTPASTAATGFSFGAPASSAGTALSFGAPASSVGTGFSFGAPASSASTGFS
FGTPASGASTGFSFGTPASSAAPGFSFGAPASSAATGFSFGTPASSAAAGFSFGAAAPAA
TAGLSFGKPFTTTTGPSFMGLGQSGGFGGFGAQQQQQQQQQQQQQQAAEQQQTQALYSAI
LNVSYYGDERDAILTKWNQLQAKWGVGKGFYAVGRPAVDFGADNPFCLMKAVGYARLPTA
KNENGLVVMRLNKKEADVRSGQQQIVAAVTGLLGGAASLSVCVDSVRATGPDKTEVQIYV
QERSPNGAVRRVPASDLHSHLAAPAQRTQLAALALEELCALVAPSAEQLQLYLDNPPAGI
DKLIWEQAKKDNPDPKTMIPVPMIGFQELHRRIQCQEQESVNQQRRLDLIASDIAGLQKT
QASTAARLGQLKRSNLELSHRILKVLVRQEVLRKQGWSIQPHEERLRVQLEALQDELATP
TQFKGRLNELLSQTRLQSQQVLQRGDRYTMDPAGQDEIRQLLRSQQHGLRQLVSVIRTDM
ADLEVIRHGLEHGPRR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcttttggtggatttggaggctttggagcagcctcatcagctccctctgggtctctg
tttggctcagcttcaaccccttcagttgcagggtttggcacaactacaacaacaaaaagt
gtcacatttggccagccaaccgccagtacaggatttggaggctttggcaccccagcagca
gctgtcccaactgccggcctcagctttggcacaccggcatcaacagctgccacgggcttc
agcttcggagcacctgcatcttcagctggcactgccctcagctttggagcacccgcatct
tctgttggcactggtttcagctttggggcgccagcatcttcagcctccactggtttcagc
tttggcaccccggcatctggagcttccacaggtttcagcttcggtacacctgcatcatca
gctgcgccgggattcagtttcggcgcgcctgcctcgtcggcggcgacagggttcagtttc
ggcacgcctgcctcgtccgcggcggcagggttcagtttcggcgccgcggcacccgccgcc
actgcgggactcagctttggcaaaccattcaccacgacgaccggtccaagctttatggga
ctcggccaatccggcggcttcggtggcttcggagcgcagcagcagcaacagcagcaacaa
cagcagcaacagcaacaggcggctgagcagcagcagacgcaagccctctacagcgccata
ctgaacgtgtcgtactatggagacgaacgggacgcaattctgaccaagtggaaccagctg
caggccaagtggggcgtcggcaaaggattttatgccgttggccggccagccgtcgacttc
ggcgccgacaacccgttctgcctgatgaaggcggtcgggtacgcgcgtctgccgaccgcc
aagaacgagaacggcctggtggtgatgcgcctcaacaagaaggaggccgacgtcaggagc
ggccagcagcagatcgtggccgcggtgacgggcctgctcggtggcgccgcctcgctctct
gtctgtgtggatagcgtgcgcgccacgggcccggacaagaccgaggtgcagatctacgtg
caggagcgcagtcccaacggtgcggtccggcgcgtgccagcctctgaccttcacagccac
ctggcggcgccggcccagcgcactcagttggcggcgctggcgctggaggagctgtgcgcc
ctggtggccccctccgccgagcagctgcagctctacctggacaacccacctgccggaatc
gataagctgatctgggagcaggccaagaaggataaccctgacccgaaaaccatgattccc
gtaccgatgatcggattccaggagctgcataggaggattcagtgtcaggagcaggagagc
gtgaaccagcagcgccggctggacctgatcgcctccgacatcgccggcctgcagaagacg
caggcctccaccgccgcccggctgggacagctgaaacgtagcaaccttgagctctcgcac
cgcatactcaaggtactggtccgtcaggaggtgctgcgcaagcagggctggagcatccag
ccgcacgaggagcggctgcgcgtccagctggaggcgctgcaggacgagctggccacgccc
acgcagttcaagggccgtctgaacgagctgctgtcgcagacgcggctgcagagtcagcag
gtgctgcagcgcggcgaccggtacacgatggacccggccggccaggacgagatccgccag
ctgctgcgctcccagcagcacggcctgcgccagctggtcagcgttatccggacggacatg
gccgatctggaggtcatccggcacgggctggagcacgggccgcgtcgttga
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