Pollicipes pollicipes (gooseneck barnacle): 119093463
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Entry
119093463 CDS
T08250
Name
(RefSeq) protein suppressor of forked-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119093463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119093463
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119093463
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
PRP6_TPR
Motif
Other DBs
NCBI-GeneID:
119093463
NCBI-ProteinID:
XP_037072313
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MPAVPLAQARSPTAEKMAQAYDFALDKIGLDYHSFPVWSEYVAFLKAAEAVGSYAENQKI
SAIRKVYQRGVVTPMNNVEILWKDYMTFENSINPIIAEKMSMEYTRDHINAKRVAREMEN
EIRGLNRNFPSVPPTGSPEEQKQISAWKKYIAWEKGNPLRTEDMSLWTRRVTYAFEQCLL
CLGHHPDVWHEYAVFLQEAAQLMTDKGDVNGAKLISDDIATVFERATQGPMRRCMLIYFA
YADFEETRMSNEKVHKIYSSLIDVEDIDPTLGYIQYMKFARRAEGIQSARKVFKKAREDK
RSRHHMYVSAALTEYYCSKNKEVAFKVFELGLKKFGDSTQYILCYIDYLSHLNEDNNTRV
LFERVLSSGMLDELSSVEVWNRFMEFECNIGDLTSIVKVEKRRTAILHQLREYEGKETAL
LVDRYRFLDLYPCSRQELRAIGYQPRFSTTSSAAAVGSGAADCVPGDDEKKLPRPDFAQM
VPYKPKQYWVPGEHPIPGGGFPLPPAAYALCQMMPPPRCFHGPFVGVDALLAIFEKLELP
DSAPEPGGANGQSASQFEMAKSIHWIVDRDSDKRVRKRANDSDDDDMQAPPANDIYRQRQ
QKRVK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgtgccgctggcgcaggctcgctcaccgaccgcagagaaaatggcgcaggcg
tacgacttcgccctggacaagatcggcctggactaccactcgttccccgtgtggagcgag
tacgtggctttcctcaaggcggcagaggctgtcggctcgtacgccgagaaccagaagatc
tcggctatcaggaaggtgtaccagcgcggcgtcgtgacgcccatgaacaacgtggaaatt
ctctggaaggactacatgacgttcgagaacagcatcaacccaatcatcgccgagaagatg
agcatggagtacacgcgcgaccacatcaacgccaagcgcgtggcgcgcgagatggagaac
gagattcggggcttgaaccgcaactttcccagcgtgccgcccaccggtagccccgaggag
cagaagcagatctccgcctggaagaagtacatcgcctgggagaagggtaacccgctgcgc
acggaggacatgagcctgtggacgcggcgcgtgacgtacgcgttcgagcagtgcctgctg
tgcctgggccatcatccggatgtgtggcacgagtacgccgtcttcctgcaggaggctgcc
cagctcatgacggacaagggggatgtgaacggcgccaagctgatctcggacgacatcgcg
accgtgttcgagcgcgccacccaggggccaatgcggcgctgcatgctcatctacttcgcc
tacgccgacttcgaggagacgcgcatgagcaacgagaaggtgcacaagatctacagcagc
ctgatcgacgtggaggacatcgacccgacgttgggctacatccagtacatgaagttcgcg
cgccgcgccgagggcatccagtcggcgcgcaaggtgttcaagaaggcgcgcgaggacaag
cgctcgcgccaccacatgtacgtgtcggcggcgctcaccgagtattactgcagcaaaaac
aaggaggtcgccttcaaggtgtttgagctgggcctgaagaagttcggggacagcacccag
tacatcctgtgctacatcgactacctgtcccatctgaatgaggacaacaacacgcgcgtg
ctgttcgagcgcgtactcagctctggcatgctggatgagctcagctctgtggaggtgtgg
aatcgcttcatggagttcgagtgcaacatcggcgacctcacaagcatcgtcaaggtggag
aagcggcgcaccgccatcttacatcagctgcgggagtacgagggcaaggagacagcgctg
ttggtggaccgctaccgcttcctggacctgtacccctgcagtcggcaggagcttagggcc
atcggctaccagcctcggttcagcacaacgagctcagcggcggcggtcggcagcggtgcc
gctgactgcgtccctggcgacgacgagaagaagctgccgcgaccagacttcgctcagatg
gtgccgtacaagccgaaacagtactgggtgcccggcgaacaccccattcctggcggtggg
ttcccgctgccaccggccgcgtacgcgctctgtcagatgatgccgccgccgcgctgcttc
cacggccccttcgtcggcgtggacgccctgctggcgatcttcgagaagctggagctgccg
gacagcgcgcccgagccgggcggcgccaacggccagagcgcctcccagttcgaaatggcc
aagtccatacactggatcgtcgaccgagacagcgataagcgcgtcaggaagcgcgccaac
gactctgacgacgacgacatgcaggcgccgcccgccaacgacatctaccggcaacgccag
cagaagcgcgtcaagtga
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