Pollicipes pollicipes (gooseneck barnacle): 119093701
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Entry
119093701 CDS
T08250
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03013
Nucleocytoplasmic transport
ppoi03015
mRNA surveillance pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119093701
09122 Translation
03013 Nucleocytoplasmic transport
119093701
03015 mRNA surveillance pathway
119093701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119093701
03041 Spliceosome [BR:
ppoi03041
]
119093701
03009 Ribosome biogenesis [BR:
ppoi03009
]
119093701
03012 Translation factors [BR:
ppoi03012
]
119093701
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119093701
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119093701
mRNA cycle factors
Stress granule specific factors
119093701
Spliceosome [BR:
ppoi03041
]
Complex C
Other components
EJC/TREX
119093701
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
90S particles
Helicases
119093701
Translation factors [BR:
ppoi03012
]
Eukaryotic type
Initiation factors
eIF-4
119093701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
UvrD-helicase
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
119093701
NCBI-ProteinID:
XP_037072596
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MDAARIGRKNQDIEDLSNVEFETSEDVEVVPTFDNMNLREDLLRGIYAYGFERPSAIQQR
AIRPIQKGRDVIAQAQSGTGKTATFSISVLQSLDTTLRETQVLILSPTRELAVQIQKVIL
ALGDYMNVQCHSCIGGTSLGEDIRKLDYGQHVVSGTPGRVFDMIRRRTLRTRSIKMLVLD
ESDEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVTSM
HGDMPQKEREAIMKEFRAGHSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKADDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccagaatcgggaggaaaaatcaagatattgaagacctgtcgaatgtagag
ttcgaaacaagcgaagatgttgaggtggtgccgacattcgataatatgaatcttcgcgag
gatctccttcggggaatctatgcctacgggtttgagcggccctccgccatccagcagcgc
gccatccgccccatccagaagggccgcgacgtgatcgcgcaggcgcagtcgggcaccggc
aagacagccaccttctccatctcggtgctgcagagcctggacaccacgctgcgggagacc
caggtgctcatcctgtcacccacccgcgagctggccgtccagatccaaaaggtgatcctg
gcgctgggcgactacatgaacgtgcagtgtcactcgtgcatcggcggcaccagcctcggc
gaggacatccgcaagcttgactacggccagcacgtggtctccggcacgcccggccgtgtc
ttcgacatgatccgccgccgcacgctgcgcacccgctccatcaagatgctcgtgctagac
gagtcagacgagatgctcaacaagggcttcaaggagcagatctacgacgtgtaccgttac
ctgccgccggccacgcaggtggtgctgctgtcggccacgctgccgcacgagatcctggag
atgaccagcaagttcatgacggaccccatccgcatcctggtgaagcgtgatgagctgacg
ctggagggcatcaagcagttcttcgtggccgtcgagcgcgaggagtggaagttcgacacc
ctctgcgacctgtacgacacgctgaccatcacccaggccgtcatcttctgcaacacgaag
cgaaaggtggactggctgacggagaagatgcgggaggccaacttcaccgtcacctccatg
cacggcgacatgccgcagaaggagcgcgaggccatcatgaaggagttccgagcaggtcac
agccgggtgctgatcaccacggacgtctgggcgcgcggcatcgacgtgcagcaggtgtcg
ctcgtcatcaactacgacctgcccaacaaccgcgagctctatatccaccggatcggccgc
tcgggacgcttcggccgcaagggcgtggccatcaacttcgtcaaggcggacgacatccgc
atcctgcgcgacatcgagcagtactactcaacgcagatcgacgagatgcccatgaacgtg
gccgacctgatataa
DBGET
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