KEGG   Pollicipes pollicipes (gooseneck barnacle): 119093793
Entry
119093793         CDS       T08250                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03030  DNA replication
ppoi03410  Base excision repair
ppoi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119093793
   03410 Base excision repair
    119093793
   03420 Nucleotide excision repair
    119093793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppoi03032]
    119093793
   03400 DNA repair and recombination proteins [BR:ppoi03400]
    119093793
Enzymes [BR:ppoi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     119093793
DNA replication proteins [BR:ppoi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    119093793
DNA repair and recombination proteins [BR:ppoi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      119093793
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N CAP-like_CFAP184
Other DBs
NCBI-GeneID: 119093793
NCBI-ProteinID: XP_037072699
LinkDB
Position
Unknown
AA seq 2261 aa
MAQAKQKGFLKNTGKFQAGKDDGTWKEDASQKRLQNSLDNDAIDTKFGFCRARDVCERVG
WLLNFHATEVLDEDKRLVGAVDYYFLQENGGRFKVSLPFKPYFYILPEEGTHEEIVAFLS
KKYAGIVVGIEPVSKEDLDLPNHLVGLKRNYLKLSFLTVSELQKVKRDVLSAVRRNRERR
QSQTAYSELLTSYMTGADGDEPDNKNQMDNVVDIREYDVPYHVRVSIDNQLFIGKWYSVR
TRGQEPPLITLRADLLEWPDCIVLAYDIETTKLPLKFPDVKTDQIMMISYMVDGQGFLIT
NREIVSQDIDDFEYTPKPEFEGPFVIFNEPNEAAVIQRFFDHILEIRPHIFVTYNGDFFD
WPFVEGRAAVHGLDMAQEIGFAKNNEGIYVSRPSIHMDCLCWVRRDSYLPVGSQNLKAVA
KAKLRYDPVELNPEDMCRMANEEPQVLSNYSVSDAVATYYLYMKYVHPFIFALCTILPMD
PDEVLRKGSGTLCEALLMVEAFKVNIIFPNKQETVHNKITEDGHVLDSETYVGGHVEAIE
SGVFRADIPCRFRMVPEAFQKLLENADATLRFAIEVEEKIPIEQVTNYEEVLSEVKAKLE
DLRDTPNRLENPIIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNAPGARCQRTMS
WMWRGEVMPAKRNELQHIRQQLEMERFPPYVAAGAEPTPGGKDRAFHQLTRDEQAAIEKK
RLSEYCRRAYKKVHITRMEERRTTICQRENSFYVDTVRAFRDRRYEYKALNKAAKKQLSE
AQASGDVGAIKSSNSRVVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVCYTGAG
LITRAREIIEQVGRPLELDTDGIWCILPASFPENYVIKTTNAKKAKVTVSFPNAILNLMV
KDHFTNDQYHDLADPETLKYTVRDENSIFFEVDGPYQAMVLPASKEEGKKLKKRYAVFNF
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEQVYESVAKIADYWLDVLYSKG
ANMPDSELFELIAENRSMSRSLADYGAQKSTSISTARRLAEFLGDQIVKDAGLSCQYIIS
KKPEGAPVTERAVPLAIFQAEPSVKRHYLRRWLKDSSLKDFDIRQILDWSYYIERLGGTI
QKIITIPAALQGVPNPVPRVQHPDWLHKRMVEKNDTLKQRKISDMFQAGAKPAAPPPPAA
DRTEADGACGDIEDLASPAGPSGRRPMVTKRKRPTSGAEEAAVLNKGWREALGSPPPLGE
DKDAMLAWLAFHKRKWRHQRLQRAERQKRARTAGAELPLVTSGGGGGPRADTLGGFLRRA
QRTVLDTPWQVIQVVPTNKSGTFRLWCLVGGDLHLIKLVVPRIFYVNQRSAKPSSEGDLW
RRCVKTLPRSHQAYHMYEYAVPEELYRQHSSELMANLSAPDIEGIYETQTPALFRIMSQL
GCVVQVDPRFHRQLSASETDTFELNQLMFKPVNQYRYLEPGSCRHLFLYQYRSGPRAMLG
LFLVPAGRALVVVVNTERSNQMPNLRTLYAAERDGKLARGAAADALPPEELSFQIQLETS
EHAACRRLTRALQAYKDEKRGPTVIAVQSQLEFGSLYAQLPILGDFPLVPVHVCDSDQLF
QSLEWQRAGARAMLRHFLNSPLILETTAEQCRYFHVPVGNLPADATLFGEDLFYSRHLRK
HNHVLWASPTERPDLGGKEADDQRLLIEGEELTRADINCPGAYETICIELDVDSLAPTAI
LQSQHISEAEGISSYVAFDAAPQVSLEEMLAGQTPQMASYDQSVLSYGAFKVLRSMVHSL
LLDVTQHQNVFADYQMVHLYRWLRSPHALLYDPALKKILHVVMKKLFLQLISELQRLGAV
IVYANFNKVVVCTKKRTVSDALAYMDYVLASVRGKELFQGMEISYTHCWEYLLWLDPANY
GGVRGALPKPAGTSGSGDAQQPGAPQDAGVAEPDDEDEGLSVEMCWNMSNYLPEEGACQV
NFSTIIASYISAVYQQIAAEVDAFTPGRTPVRRRVSSQPQAKFQDAVDFAKNLITGEMAQ
KLFMITQKMQKKLHTTRGSEPNALFPQLTGSHLLMQNPALEFVKAICKVLSLDQHVEAEV
SKLRRDLLKLIGVGEFAAEAEWVDPCVSHVLPEVICKACNHCRDVDLCQDTHVGEAGGRP
CWKCPLCDTPYDQDEVEHALLSVMQRKLVSFVLQDLQCVKCKQVKQLNMSAICECAGEYR
GLDSRSDLLSRLRVFRNIATAFSMPILGDHVAWLLRQSGAG
NT seq 6786 nt   +upstreamnt  +downstreamnt
atggcccaagcgaagcaaaagggattcttgaaaaatactgggaagttccaggctggaaaa
gatgatggtacttggaaggaggatgcctcccagaagcggctgcagaactcgctcgacaac
gacgccatcgacaccaagttcgggttctgccgtgcccgcgacgtgtgcgagcgcgtcggc
tggctgctcaacttccacgcgacggaggtgctggacgaggacaagcggctggtgggcgcc
gtcgactactacttccttcaggagaacggcggccgcttcaaggtctcgctgcccttcaaa
ccgtacttctacatcctaccggaggagggcacccacgaggagatcgtcgccttcctctcc
aagaagtatgccggcatcgtggtcggcatcgagcccgtctccaaggaggacctggacctg
ccgaaccaccttgtgggcctgaagaggaactacctgaagctgtccttcctcaccgtcagc
gaactgcagaaggtcaagcgggacgtgctgtcggcggtgcgacggaacagagagcggcgc
cagtcgcagacggcgtactcggagctgctgacgtcgtacatgacgggcgccgacggggac
gagccggacaacaagaaccagatggacaacgtggtggacatcagagagtatgacgtgccg
taccacgtgcgcgtcagcatcgacaaccagctgttcatcggcaagtggtacagcgtgcgc
acgcgcggccaggagccgccgctgatcacgctgcgggcggacctgctggagtggcccgac
tgtatcgtgctggcgtacgacatcgagacgaccaagctgccactcaagttccccgacgtc
aagactgaccagatcatgatgatctcctacatggtggacggccagggctttctcatcacg
aaccgcgagattgtcagccaggacatcgacgacttcgagtacaccccgaagccggagttc
gaggggccgttcgtcatcttcaacgagccgaacgaggccgctgtgattcagcgcttcttc
gaccacattcttgagatccgaccgcatatctttgtcacctacaacggcgactttttcgac
tggccgttcgtcgaaggccgcgccgccgtgcacggcctcgacatggcccaggagatcggc
ttcgccaagaacaacgagggcatctacgtgtctcgtccgagcatacacatggactgcctc
tgctgggtccgccgcgactcgtaccttccggtcggctcgcagaacctgaaggccgtggcc
aaggccaagctgcgctacgacccggtcgagctgaacccggaggacatgtgccggatggcc
aacgaggagccgcaggtgctctccaactactccgtgtcggacgccgtggccacgtactac
ctgtacatgaagtacgtgcaccccttcatattcgccctctgcacgatcctgcccatggac
ccggacgaggtgctgcgcaagggctccggcacgctgtgcgaggccctgctcatggtggag
gccttcaaggtcaacatcatcttccccaacaagcaggagacggtgcacaacaagatcacc
gaggacggccacgtgctcgacagcgagacatacgtgggcggccacgtggaggccatcgag
tcgggcgtgttccgcgcagacatcccctgccggttccgcatggtccccgaggcgttccag
aagctgctggagaacgccgacgccacgctgcgcttcgccatcgaggtggaggagaagatc
cccatagagcaggtcaccaactacgaggaggtgctgtcagaggtcaaggccaagctggaa
gacctgcgcgacacgcctaatcgcctggagaaccccatcatctaccacctggacgtgggc
gccatgtacccgaacatcatcctgaccaaccggctgcagccgtcggccatggtggacgag
gccacgtgcgccgcgtgcgacttcaacgccccgggcgcgcgctgccagcgcaccatgagc
tggatgtggcgtggcgaggtgatgccggccaaacgcaacgagctacagcacatccggcag
cagctggagatggagaggttcccgccgtacgtggcggccggcgccgagccgacgcccggc
ggcaaggaccgggccttccatcagctgacgcgcgacgaacaggccgccatcgagaagaag
cggctctccgagtactgccggcgcgcctataagaaggtgcacatcacacgaatggaggag
cggcgcaccaccatctgccagagagagaacagcttttacgtggacaccgtgcgcgccttc
cgcgaccgtcgctacgagtacaaggcgctcaacaaggccgccaagaaacagctgtctgag
gcgcaggcgtctggcgacgtcggcgccatcaagtccagcaacagccgcgtggtgctgtac
gactcgctccagctggcccacaagtgcatcctcaactcgttctacggctacgtgatgcgg
aagggcgctcgctggcacagcatggagatggcggggatcgtgtgctacacgggcgccggc
ctcatcacccgagcgagggaaatcatcgaacaggtgggtcggccgctggagctggacacg
gacggcatctggtgcatcctgcccgcctccttcccggagaactacgtcatcaagaccacc
aacgccaagaaggccaaggtcaccgtcagcttccccaacgccatcctcaacttgatggtg
aaggaccacttcaccaacgatcagtaccacgacctggcggacccggagactctcaaatac
accgtgcgtgatgagaactccatctttttcgaggtggacggcccttaccaggccatggtg
cttcccgcctcgaaagaggagggcaagaagctcaagaagcggtacgccgtgttcaacttt
gacggctcgctggcggaactgaaggggttcgaggtgaaacggcgcggggagctgcagctc
atcaagatcttccagtcatccgtgttcgaagcgttcctcaagggctccacgctggagcag
gtgtacgagagcgtggccaagatcgccgactactggctggacgtgctctacagcaagggg
gcgaacatgccggactcggagctgttcgagctgatcgccgagaaccgcagcatgtcgcgc
agtctggccgactacggcgcgcagaagtccacctcgatcagcacggcccggcgcctggcc
gagttcctcggcgatcagatcgtcaaggacgccggcctgtcgtgccagtacatcatctcc
aagaagccagagggcgcgccagtgacggagagggcggtcccgttggccatcttccaggcc
gagccgagtgtgaagcggcactacttgcgccgctggctcaaggactcgtcgctcaaggac
ttcgacatccgccagatcctcgactggagctactacatcgagcggctgggcggcaccatt
cagaagatcatcacgatcccggcggcgctgcagggggtgcccaaccccgtgccgcgcgtg
cagcacccggactggctgcacaagcgcatggtcgagaagaacgacacgctgaagcagcgc
aagatctcggacatgttccaggcgggcgccaagccggccgcgccgccgccgccggccgcc
gatcgcacggaggcggacggtgcctgcggcgacatcgaggacctggcctcgccggccggg
ccttccggccgccgcccgatggtcaccaagcggaagcgacccacttctggtgccgaggag
gcggccgtcctgaacaagggctggcgcgaggccctcggctcgccgccgccgctcggcgag
gacaaggacgcgatgctggcttggctggcgttccataagcgcaagtggcgccaccagcgg
ttgcagcgcgccgagcggcagaagcgcgcgcgcacggccggcgctgagctgccgctggtg
acgtcgggcggcggcggggggccgcgggccgacacgctcgggggcttcctgcggcgcgcc
cagcgcaccgtgctcgacacaccctggcaggtcatccaggtggtgcccacgaacaaatca
ggcacgttccggctctggtgtttggttggtggtgacctccatctgatcaagctggtggtg
ccacgcatcttctacgtgaaccagcgctcagccaagcccagcagcgagggtgacctgtgg
cggcgctgcgtcaagacgctgccccgctcgcaccaggcgtaccacatgtacgagtacgcg
gtgcccgaggagctgtaccggcagcacagcagtgagctgatggccaacctgtcggcgccc
gacatcgagggcatctacgagacgcagacgccggccctgttccgcatcatgtcccagctc
ggctgcgtggtccaggtggacccgcgcttccaccgccagctgtcggcctccgagacggac
acgttcgagctgaaccagctgatgttcaagccggtgaaccagtaccggtacctggagccg
ggcagctgccgccacctgttcctgtaccagtaccgcagcgggccgcgggccatgctcggc
ctcttcctcgtgccggccgggcgcgcgctggtcgtcgtcgtcaacacagagcgctccaac
cagatgcccaacctgcgcacgctgtacgcggcggagcgcgacggcaagctggcgcgcggc
gcggcggccgacgcgctgccgccggaggagctcagcttccagatccagctggagacgtcc
gagcacgcggcgtgccgcaggctgacgcgcgccctgcaggcctacaaggacgagaagcgg
gggcccaccgtgatcgccgtccaatcgcagctcgagttcggctcgctgtacgcgcagctg
ccgatcctgggcgacttcccgctggtgccggtgcacgtgtgcgactcggaccagctgttc
cagagcctggagtggcagcgggccggcgcgcgcgccatgctgcggcacttcctcaactcg
ccgctcatcctggagacgaccgccgagcagtgcaggtatttccacgtgccagtcggtaac
ctgccggccgacgccaccctgttcggcgaggatctcttctactcccggcacctccgcaag
cacaaccacgtgctgtgggcgtcccccactgagcggccggacctcggcggcaaggaggcc
gacgaccagagactgctgattgagggcgaggagctgaccagggccgacatcaactgtccg
ggtgcctacgagaccatctgcatcgaactggacgtggacagcctggcgcccaccgccatc
ctccagtcgcagcacatcagcgaggccgaaggcatcagctcgtacgtggcgttcgacgcg
gcgccgcaggtgtcgctggaggagatgctggccggccagacgccgcagatggcctcctac
gaccagtccgtgctcagctacggcgccttcaaggtgctgcgctccatggtgcactcgctg
ctgctggacgtcactcagcaccagaacgtgttcgccgactaccagatggtgcacctctac
aggtggctgcgcagcccgcacgcgctcctctacgacccggccctcaagaagatcctgcac
gtggtcatgaagaagctgttcctgcagctgatctccgagctgcagcggctgggggccgtc
atcgtgtacgccaatttcaacaaggtggtggtgtgcaccaagaagcggacggtgtcggac
gcgctggcctacatggactacgtgctggcgtcggtgcgcggcaaggagctgttccagggc
atggagatatcgtacacccactgctgggagtacctgctctggctcgatccggccaactac
ggtggcgtgcgcggcgcgctgcccaagccggcgggcacctccggctcgggggatgcccag
cagccgggcgcgccgcaggacgccggcgtggccgagcccgacgacgaggacgaggggctg
tccgtcgagatgtgctggaacatgagcaactacctgccggaggagggcgcctgccaggtc
aacttcagcaccatcatcgccagctacatctcggccgtgtaccagcagatagcggcggag
gtggacgccttcaccccaggtcgtacgccggtgcggcggcgcgtctccagccagccgcag
gccaagttccaggacgcggtcgacttcgccaagaacctcatcacgggcgagatggcgcag
aagctgttcatgatcacgcagaagatgcagaagaagctgcacacgacgcgcggctcggag
ccgaacgcgctgttcccgcagctgaccggctctcacctgctcatgcagaacccggcgctc
gagttcgtcaaggccatctgcaaggtgctgtcgctggaccagcacgtggaggcggaggtg
agcaagctgcgccgcgacctgctgaagctgatcggggtcggcgagttcgccgccgaagcc
gagtgggttgacccgtgcgtctcgcacgtgctgcccgaggtcatctgcaaggcctgcaac
cactgccgcgacgtcgacctctgccaggacacgcacgtgggcgaggcgggcggcaggccg
tgctggaagtgtccgctgtgcgacacaccttacgaccaggacgaggtcgagcacgcgctg
ctctctgtcatgcagcgcaagctcgtgtcgttcgtcctccaggatctgcagtgtgtcaag
tgcaaacaggtaaagcaactgaacatgtcggccatctgcgagtgcgccggcgagtaccgc
ggcctcgacagccgttcggacctgctcagtcgtctgcgcgtgttccgcaacatcgccacc
gccttcagcatgcccatcctcggcgaccatgtcgcctggcttctacggcagagtggcgct
ggctag

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