Pollicipes pollicipes (gooseneck barnacle): 119094461
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Entry
119094461 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04120
Ubiquitin mediated proteolysis
ppoi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119094461
04120 Ubiquitin mediated proteolysis
119094461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppoi04121
]
119094461
Enzymes [BR:
ppoi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119094461
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119094461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_11
zf-RING_16
zf-C3HC4_3
zf-HC5HC2H
zf-RING_5
zf-RING-like
DUF8129
FAR1_N
zf-ANAPC11
zf_RING_Vps8_fungal
zf-HC5HC2H_2
zf-RING_Vps41
FANCL_C
Motif
Other DBs
NCBI-GeneID:
119094461
NCBI-ProteinID:
XP_037073412
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MNASLMASLSVVLTSAVIGNAFYQKKQFYPSVVYLTKSNASLAVIYVQAFVLVILFGKLV
RKIFFGQLRAAEFEHLMERSWYAVTETCLAFTMFRDDLSPKFVALFTLLLFLKSFHWLAE
DRVDYMERSPVITWLFHIRIVSLLLLLSLLDIGFIAFAYHSTVKRGASVQLVFGFEYAIL
LTVVAYVLVKYLLHAVDLQREAPWENKAVHLLHTELLIGFVKVVLYMVFTLIMVKIHTLP
LFAIRPMYLALRSFKKALSDVILSRRAIHNMNTLYPNVTEEELSNTDSVCIICREEMTAA
AGAKKLPCNHVFHALCLRSWFQRQQTCPTCRMDILRAPGPSAWSVCRVLLRWESAPLPGA
GTGRRGAAGAPTAPLPPHLPTFPFNQFMMMPPMPPPPTDLSGLTEAELRQLELQERAAVE
ARIRCLRDIRTLLDALWASDCLCRRRPLLLLLPEPPRLEEPPRPPPPSDRPGPCVVAEQQ
HVRLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtctctgatggcttcgctcagcgtggtgctgacgtcagccgtcattgggaac
gccttctaccagaagaagcagttctacccgtctgttgtctatctcaccaaatcaaacgcc
agtcttgcggttatctatgtccaagcttttgtactggttatactgttcggcaagctggtc
aggaagatattcttcggtcagctccgggccgccgaattcgagcacttgatggagcggtcc
tggtacgccgtcaccgagacctgcctggccttcaccatgttcagggacgacctcagcccc
aagttcgtggcgctcttcaccctgctgctcttcctcaagtcgttccactggctggccgag
gaccgggtggactacatggagagaagtcctgtgattacctggctattccatatcaggatc
gtttcgctgctgctgctgctgtcgctgctggacatcggcttcatcgcgttcgcgtaccac
tcgacggtgaagcgcggcgcctcggtgcagctggtgttcggcttcgagtacgccatcctg
ctgacggtggtggcgtacgtgctggtcaagtacctgctgcacgccgtcgatctgcagcgc
gaggcgccctgggagaacaaggccgtccacctgctgcatacggaactgctcatcgggttc
gtgaaggtggtgctgtacatggtgttcacgctgatcatggtgaagatccacacgctgccg
ctgttcgccatccggcccatgtacctggcgctcaggtcattcaagaaggcgctcagtgac
gtcatattgtcaagacgcgccattcacaatatgaacacgctgtacccgaacgtcaccgaa
gaggagctgagcaacacggacagcgtgtgcatcatctgccgcgaggagatgaccgcagcg
gccggtgccaagaagctgccctgcaaccacgtgttccacgcgctctgcctgcgctcgtgg
ttccagcggcagcagacgtgccccacgtgtcggatggacatcctgcgcgcgcccggcccg
tcggcgtggagcgtgtgccgcgtgctgctgcgttgggagtccgctcctcttccgggagcc
ggcaccggcaggcgaggtgccgccggcgcaccgaccgctccgctgcctccgcatcttccc
acattcccgttcaaccagtttatgatgatgccgccgatgccgccgccgccgaccgacctc
tccggcctgacggaggcagagctgcgccagctcgagctgcaggagcgcgccgccgtcgag
gcgcgcatccgctgcctgcgagacatccgcacgctgctggacgcgctctgggccagcgac
tgcctctgccgccgccggccgctgctgctgctgctaccggagccgccacgactggaggag
ccgccgcggccgccaccaccttcggaccggccaggtccgtgcgtggtcgccgaacagcag
cacgtgcggcttctgtaa
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