Pollicipes pollicipes (gooseneck barnacle): 119094947
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Entry
119094947 CDS
T08250
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoi03009
]
119094947
03012 Translation factors [BR:
ppoi03012
]
119094947
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119094947
5.6.2.5 RNA 5'-3' helicase
119094947
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
Other ribosome biogenesis factors
119094947
Translation factors [BR:
ppoi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119094947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
UvrD_C_2
SLFN-g3_helicase
ResIII
AAA_22
AAA
DEAD
AAA_24
Motif
Other DBs
NCBI-GeneID:
119094947
NCBI-ProteinID:
XP_037073753
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MELVTCQDFVRLHLRLLEMEHRQQRERQRQQASGNLLSSVAVTAASRTFCGQRLVLRSTG
PRARKLPRHSIRANDHVITRRASDSVVARRTAGRTASREPVPGDVWCGVVSRVTKAELTL
DFGEVTSLVVGEPVSVMRTDDEMTHKNMVKALEELAEAKGGPILRMRAALFAEHGPPGTG
KTATVVEVILQHQRLGQRVLVCAASHNAVDNVLDRLEAARGERMVRVAVETVKDIDVSDD
DDDDDDGDASEHFPTDGKAPFDLVVIEECSQALEAACWLAAPLANKLLLAGDHSQLPPMV
LSREAAEKGLAVSLMERQMALHGAAVVRMLRTQYRMHEHIQRWPSEAMYGSLLEAAPAVC
RHRLSQLPGVRDTTETGPVLLVVDTAGCRLEETPDSKMGSIANEGEADIVVAHARALLRA
GLDIGQLGVISPYKRQLDLVRARLRQLRLDVAVGTVDGFQGREKEAVLLSLVRSNQRGQV
GFLAERRRINVAVTRARRQLFVVCDTATVRSDAFLASLVDHLVEHGEVRSAHAYRNYLGV
AARGRWRWLDATEAGEP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagctggtaacctgccaggacttcgttcgtctccacctgcgcctgctggagatggag
caccggcaacagcgggagcgacagcggcagcaggcgtcaggcaatttgctgtcctcggtg
gccgtcaccgccgccagtcgcaccttttgtggtcagcgtctggtgctgcgttcgaccggc
ccccgggcacgcaaactgccccggcacagcatccgcgccaacgaccatgtgatcacgcgc
cgggcctcggactccgtggtggcgcgtcgtacagcggggcgcacggcctcgcgcgagccg
gtgccaggcgacgtctggtgcggcgtcgtgtcacgcgtcaccaaggccgagctcacgctg
gacttcggagaggtcacctcgctcgtcgtgggcgagcccgtcagcgtgatgaggaccgac
gacgagatgacgcacaagaacatggtgaaagcgctggaggagctggctgaagcgaagggt
gggccgatcctgcggatgcgggccgcgctgttcgccgagcacggcccgcccggcaccggc
aagaccgccaccgttgtcgaggtgatcctgcagcaccagcggctgggccagcgtgtgctc
gtgtgtgcggcgtcacacaatgcggtggacaacgttctggaccgtctggaggccgctcgt
ggcgagaggatggttcgtgtggctgtggaaacagtcaaagacatcgacgtgtccgacgac
gacgacgacgacgacgacggcgacgcttcagaacattttccaacagacggcaaggcgccg
tttgacttagtcgtgatcgaggaatgttcgcaagcactggaggcggcctgctggctagcg
gcgcccctcgcaaacaagctgctgctggcgggcgaccactctcagctgccgccgatggtc
ctgagccgggaggccgcggagaagggcctggccgtgtcgctgatggagcgccaaatggcg
ctgcacggtgcggcagtcgtgcgcatgctgcgcacccagtaccgcatgcacgagcacatt
cagcgctggccgtcggaggcgatgtacggcagccttctagaggcggcgccggccgtgtgc
cggcaccgactgtcgcagttgccgggcgtgcgcgacacgacagagacgggccccgtcctg
ctggtggtcgacacggccggctgtcggctggaggagacgcccgactcaaagatgggctcc
attgcgaacgagggcgaggcggacatcgtggtggcacacgcgcgtgcgctgctgcgcgct
gggctagatatcggccagctgggcgtcatctcgccctacaagcggcagctggacctggtg
cgcgcccgcctgcgtcagctgcggctggacgtggcggtgggcacggtggacggcttccag
ggccgtgagaaggaggccgtgctgctgtcgctggtgcgatccaaccagcgcggtcaggtc
ggcttcctggccgagcgacgccgcatcaacgtggcggtgacgcgagcccgtcgacagctg
ttcgtcgtctgcgacacggctaccgtgcggtccgacgcattcctggcctcgctggtcgac
cacctggtggagcatggcgaagtccgctcggcgcacgcctacaggaactacctgggggtg
gccgcgcgcggccggtggcgctggctcgatgccaccgaggccggcgaaccctga
DBGET
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