Pollicipes pollicipes (gooseneck barnacle): 119095196
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Entry
119095196 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03440
Homologous recombination
ppoi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119095196
03460 Fanconi anemia pathway
119095196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoi03032
]
119095196
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119095196
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119095196
DNA replication proteins [BR:
ppoi03032
]
Eukaryotic type
DNA Topoisomerases
119095196
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119095196
FA (Fanconi anemia) pathway
119095196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
119095196
NCBI-ProteinID:
XP_037073964
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MRVLNVAEKNDAAKSLAGLMSGGQARRREGLSKFNKIYEFEYELQGQRCEMTMTSVSGHL
LNYEFPASYRKWMSCSPVALFDCPVVKQCLQDYEPIKKTLEREARRCQLLVIWTDCDRXG
ENIGFEVVDVCRAARPGLRVLRARFSEITAASVRRAVANLQQPDARASAAVDVRQQLDLR
IGAAFTRFQTLRLKQVFPASLADRLISYGSCQFPTLGFVVERYKAIQSFIPEQFWKIRVV
HQVEGRSVEFNWKRVRLFDQLCCQVLFEKCCESSTATVTAVQSKPKSKWRPLPLDTVELE
KLASRKLRISAKETMKLAEKLYTQGFLSYPRTETNIFPKELNLVPLVQQQVNDPNWGGFA
ARLLETGVNPRQGKKTDNAHPPIHPTKAAPGLTGNEQRLYEFVVRHFLACLSADAQGQET
LVEADVAGEKFSANGLAITARNYLDVYPYDKWSDKELPVYRRGDQFAAELSMPVGETSPP
SLLTEADLIALMDKHGIGTDATHADHIETIKSRLYVGLEDNKFTPGTLGMGLVEGYDSMG
FQMSKPNLRAELEADLKRICEGTRDPDTVLREQIDRYRGVFEEAMRQAQKLDQALSPYLG
EAPTAGAAPGVGVDLQVPETVCQCPGCGQPIIIKTRREGTGFLLSCSAFPACRVHMWMPA
TVEALAAAYAPYYPRRHTACVGGCDAEFMETVGLRPLAAPAPGAGASQRSGDSGYGSSLT
QSRTSVTSNSQSRPSAATNQRPAATPFSQSRPAGTSSSQSRLATAAANQRPAATPFSQSR
ATAAPASQLRPFAATNRWPPRAGGPAPSVGDGENGAVCDCGQPALQLTVRKEGPNKGRQF
YKCGAGSAPGQGCNFFLWADDGPAAAAAAALPGSSPHLPGTLDDVTCNCGLPPRRCTVQK
EGPNRGREFLGCSKPRSESCRFFQWCDEPSSAPAGGPQGFSQGWGRDPSRSRGTCLSSLG
GACGLDSNWCSNSMNCFDSNSNCFDSMLELD
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgctgaacgtggccgagaagaacgacgcggccaagagtctggctggcctgatg
tccggaggccaggcgcgtcggcgtgagggcctgtccaagttcaacaagatctacgagttc
gagtacgagctgcagggccagcggtgcgagatgacgatgacgtccgtctcaggccacctg
ctcaactacgagttccccgccagctacaggaagtggatgagctgcagcccagtcgcgctc
ttcgactgcccggtggtgaagcagtgcttgcaggactacgagcccatcaagaaaaccctc
gagcgggaggcgcgccgctgtcagttgctggtgatctggaccgactgtgacaggngaggc
gaaaacatcggcttcgaggtggtggacgtgtgccgcgccgccaggcccggtctgcgcgtg
ctcagggcgcgcttctcggagatcacggccgcctcggtgcgtcgggcggtggccaacctg
cagcagccggacgcgcgcgccagcgccgccgtcgacgtacggcagcagctggacctgcgc
atcggcgccgcattcacccggttccagacactgcgcctaaagcaggtgttcccggccagc
ctggccgaccggctcatcagctacggctcgtgccagttccccacgctggggttcgtggtg
gagcgctacaaggccatccagagcttcattccggagcagttctggaagatccgagtggtc
caccaggtggaggggaggtcggtggagttcaactggaaacgcgtgcggctgtttgaccag
ctctgctgccaggtgctgttcgagaagtgctgcgagagcagcacggccaccgtcaccgcc
gtccagtccaagcccaagtccaagtggcgcccgctgcctctcgacacagtggagctggag
aagctggcgtcgcggaagctgcgcatctcggcgaaggagacgatgaagctggctgagaag
ctgtacacgcagggcttcctctcttacccgcgcacggagaccaacatcttccccaaggag
ctgaacctggtgccgctggtgcagcagcaggtcaacgaccccaactggggagggttcgcc
gctcggctgttggagaccggcgtcaacccgcgccagggcaagaagacggacaacgcccat
ccgcctatccacccgaccaaggcggcgccgggcctgaccggcaacgagcaacgcctgtac
gagtttgtggtgcggcacttcttggcctgcctgtctgccgacgcccagggtcaggagacg
ctggtagaggccgacgtcgctggagagaagttctccgccaacgggctggcgatcaccgcg
cgcaactacctggacgtgtacccgtacgacaagtggtcggacaaggagctgccggtgtac
aggcggggtgaccagttcgcggccgagctgtcgatgcctgtgggcgagacgtcgccgccg
tcgctgctgaccgaggctgacctgatcgcgctgatggacaagcacggcatcggcacggac
gcaacgcatgccgaccacatagagacgatcaagtcgcggctgtacgtcggactcgaggac
aacaagttcacgccgggcacgctgggcatgggcctggtggagggctacgacagcatgggc
ttccagatgtccaagcccaacctgcgcgccgagctggaggccgaccttaagcggatctgt
gaaggcacgcgcgacccggacaccgtgctgcgcgagcagatcgaccggtaccggggcgtc
ttcgaggaggccatgagacaggcgcagaagctggaccaggccctgtcgccgtacctgggg
gaggcgccgacggccggcgccgcgccgggtgtcggcgtcgacctgcaagtgccggagacg
gtctgtcagtgccccggctgcggccagcccatcatcatcaagacgcgtcgcgagggcacc
ggcttcctgctctcgtgctcggccttcccggcctgccgcgtgcacatgtggatgccggcg
acggtggaggcgctcgcggccgcctacgcgccctactacccgcgccggcacacggcctgc
gtcggcggctgcgacgccgagttcatggagacggtggggctgcggccgctggcggcgccg
gcgccgggcgccggtgccagtcagcggtcgggagacagcggatacggcagctcactcacc
caatcacgcacgtcggtaacatccaacagccagtcacggccgagcgccgccaccaatcag
cggccggcggcgacgccctttagccaatcacgtcctgcggggacgtcttccagccaatca
cgtctggccaccgccgctgccaatcagagaccggcagcgacacccttcagccaatcacgt
gcgacagcagctccggccagccaactgcgtccatttgcggcgaccaatcggtggccgccg
cgtgcgggaggccccgccccgtcggtcggcgacggcgagaacggcgccgtgtgcgactgc
ggccagccggcgcttcagctcaccgtccggaaggaggggccgaacaaaggtcgacagttc
tacaagtgcggcgccggctcggcgcccggccagggctgcaacttcttcctgtgggcggac
gacgggcccgcggcggcggcggcggcggcgctgcccggctcctcgccgcatctgcccggt
acgctggatgacgtcacgtgcaactgcggcctgccgccccgacggtgcacggtgcagaag
gaggggcccaaccggggccgcgagttcctcggctgctccaagccgcgcagcgagagctgc
cgcttcttccagtggtgtgacgagccgtcatcggcgccggccggcgggccgcagggcttc
agccagggctggggccgggacccctcgcggtctcgcggcacgtgtctctcctcgctcggc
ggcgcctgtggcctggactcgaactggtgctcgaactcgatgaactgcttcgactcgaac
tcgaactgcttcgactcgatgctcgaactggattga
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