Pollicipes pollicipes (gooseneck barnacle): 119095433
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Entry
119095433 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119095433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoi03032
]
119095433
03029 Mitochondrial biogenesis [BR:
ppoi03029
]
119095433
Enzymes [BR:
ppoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119095433
DNA replication proteins [BR:
ppoi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
119095433
Mitochondrial biogenesis [BR:
ppoi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
119095433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
119095433
NCBI-ProteinID:
XP_037074155
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MLSPRLHAQVFGAPPAPASPERVQAAVEHLTEHGLWGRPTDTFHEPPLQLPPLRAGSLEE
HFRQEAERQSGPYRRLLEALVAGEAPEPPSHWLMTAGWTRYDPDGSTRPVAVPDCDAMVL
DVEVVVRRRMVVMATAVSAAAWYGWVSPQLVEGTVPASDTPTLAQLIPLDAYSRRPRVVA
GHNVSYDRAWVREQYALRPTGTRFVDTMSMHIAVGGITSQQRALMLGAKKNDEKRPVRRA
APDLNWMSQTSMNSLADVYKLYCGETLDKDARDVFVRGDVADVRAEFQSLMAYCAGDSRA
TWRVLRRLLPEFLERFPHPATLAGTLHMGQVYLPVGPAWPRYLRLCDETYHDLENELSAA
LRRVAAAACRAAHGGAHAADPWLWDLDWSTQPLRLKKAPPPPRQPPPPPPPLPAGWADGC
RPLTEREFESDMPLPDPLVERFAPLWRTASRLYKKQSLLPGYPKWYRELCNKDGSGLTEL
TTSKRVVPKLLRLTWDGYPLHFTSRFGWGFLVPGRPDPDLRPPLAAEHGSPDFPLEALQS
LVAARPAGRPDPTEESPAIDEVALRGCRFHPLPHKDGLGNNVGNPLAKHFLGQVEGGTLS
SAGGSSAERVLRVSQTISYWRNNQERITSQLAVFGRRSELPRSVTSHPDYEADQQYGAIL
PQVKVAGTLTRRAVERTWLTASNVQPDRLGSELRAMVQAPPGHHLVGADVDSQELWLSAV
ISDAAFTRLHGSTAFSWMTLQGKKSEGTDLHSRTAELIGVSRGLAKVLNYGRIYGGARPF
AVQLVRQHSRQLPQLELERRVAEMYRRTKGSRRWPLNGRGRRALEQLRRALQDGEEPDPV
LSDLLSGVADDEPWTVARVTLLGRLSGASRNWRDLVGRPVWYGGTESYMFNELESVASGL
TPSTPVLGARITRGLEPELVGDNFMTSRVNWVVQSSAVDFLHLMLVCMRWLMDECRIEGR
FCISIHDEVRYLVRSEDRYRAALALQVTNLLTRAMFARALGLDDLPQSVAFFSAVDIDRA
LRKEVTDDCRTPSNPHGLEATYKVPPGEAVDIHQTVEKAGSSLLPRPRAERAPRQRQMSP
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgccacgactgcacgcgcaggtgttcggcgcgcctccagcgccggccagccca
gagcgcgtgcaggcggcggtggagcatctgaccgagcacggcctgtggggccggccgacc
gacacgttccacgagccgccgcttcagctgccgccgctgcgcgccggctcgctggaggag
cacttccgccaggaagcggagcgccagagcggcccataccgccgcctcctggaggcgctg
gtggccggcgaggcgcccgagccgccctcccactggctcatgaccgccggatggacgcgc
tacgacccggacggcagcacgcggccggtggccgtgcccgactgcgacgccatggtgctc
gacgtggaggtggtggtgcggcggcgcatggttgtcatggcgacagcagtgtcggcggcc
gcctggtacggctgggtcagcccgcagctggtggagggcaccgtgccagcatccgatacg
cccacgctggcccagctgatcccgctggacgcgtacagccggcgaccccgtgtcgtggcc
ggccacaacgtcagctacgaccgcgcctgggtgcgcgagcagtacgcgctccgtccgacc
ggcacacgctttgtggacacgatgagcatgcatattgcggtcggcggcatcacaagccag
cagcgcgcgctaatgctcggcgccaagaagaacgacgagaagcgaccggtgcgccgcgcc
gcgccagacctcaactggatgtcgcaaacgtccatgaactcgctggccgacgtgtacaag
ctgtactgcggcgagacgttggacaaggacgcgcgcgacgtgttcgtgcgtggcgacgtg
gcagacgtgcgcgcggagttccagtcgctgatggcctattgcgccggcgactcgcgcgcc
acgtggcgtgttctgcgccgcctgctgcccgagttcctggagaggttcccacacccggcc
acgctggcgggcacgctgcacatgggccaggtgtacctgccggtgggccccgcctggccg
cgttacctgcgcctctgtgacgagacctaccacgacctggagaacgagctgagtgcggcg
ctgcgccgcgtggcggccgccgcctgccgcgccgcgcacggcggcgcccacgccgccgac
ccctggctctgggacctggactggtcgacgcagccgctgcggctgaagaaggcgccgccg
ccgccgcggcagccgccgccgccgccgccgccgctgccggccggctgggcggacggctgc
cggccgctgacggagcgggaattcgagtcggacatgccgctgccggacccgctggtggag
cggtttgcgcctctctggcgcaccgcctccagactgtacaagaagcagtcgctgctgccc
ggctaccccaagtggtaccgcgagctctgcaacaaggacggctccgggcttaccgagctg
accacctccaagcgggtggtaccgaagctgctgcgccttacctgggacggctacccgctc
cacttcactagtcgcttcggctggggtttcctggtgccgggccggccggacccggacctg
cgcccgccgctggctgccgagcacggatcgcccgacttcccgctagaggcgctgcagtcg
ctggtggcggcgcgcccggccggccggcctgacccgacggaggagagtccggccatcgac
gaggtggcgctgcggggctgccgcttccacccgctgccgcacaaggacggcctgggcaac
aacgtcggcaacccgctcgccaagcacttcctgggtcaggtggagggcggcacgctgtcg
tcggccggcggctcatcggccgagcgcgtgctgcgtgtcagccagactatctcgtactgg
cgcaacaaccaggagcgcatcacctcccagctggcggtgttcggccggcgctccgagctg
ccgcgcagcgtcacctcgcacccggactacgaggccgaccagcagtacggcgccatcctg
ccacaggtgaaggtggccggcacgctgactcgccgggcggtggagcgcacctggctgacg
gccagtaacgtgcagccggaccgtctgggctcagagctgcgcgccatggtgcaggcgccg
cccggccaccacctggtcggcgcggacgtggattcgcaggagctctggctgtcggccgtc
atcagcgacgccgccttcacccgcctgcacggcagcaccgccttcagctggatgacgctg
cagggcaagaagtccgagggcacggacctgcactcgcgtacggccgaactgatcggagtg
tcccgcggcctggccaaggtgctcaactacggccgtatctacggcggggcgcgcccgttc
gccgtgcagctggtgcgccagcacagccgccagctgccgcagctggagctggagcgacgc
gtggccgagatgtaccgccgcaccaagggcagccgacgctggccgctcaacggccgcggc
cgtcgcgcgctggagcagctgaggcgggcgctgcaggacggagaggagccggatccggtg
ctctcggacctgctgtcgggcgtcgctgacgacgaaccgtggacggtggcgcgcgtcacg
ctgctggggcggctctcgggtgcctcccggaactggcgcgacctggtgggccggcccgtc
tggtacggcggcaccgagagctacatgttcaacgagctggagtcggtggcctcggggctg
acaccgagcacgccggtgctgggcgcgcgcatcacgcgcggtctggagccagagctggtg
ggcgacaacttcatgacgtcacgcgtcaactgggtggtccagagctcggctgtcgacttc
ctccacctgatgctggtctgcatgcgctggctgatggacgagtgccgcatcgagggccgc
ttctgcatcagcatccacgacgaagtgcggtacctggtgcgctcggaggaccggtaccgg
gccgccctggcgctgcaggtcaccaacctgctgacgcgcgccatgttcgcccgcgcgctc
ggcctggacgacctgccgcagtcggtggccttcttcagcgccgtggacatcgaccgcgcc
ctccgcaaggaagtcaccgatgactgcaggacgccgtccaacccgcacggtctggaggcc
acctacaaggtgccgccgggcgaggcggtcgacatccaccagacggtggagaaggccggc
agctcgctgctgccgcggccgcgcgccgagagggctccgcgacagcggcagatgtcgccc
tga
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