Pollicipes pollicipes (gooseneck barnacle): 119095638
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Entry
119095638 CDS
T08250
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppoi03037
]
119095638
Cilium and associated proteins [BR:
ppoi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
119095638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
WDR55
TPR_2
WD40_Prp19
TPR_GEMI5
TPR_IFT80_172
EIF3I
Vps16_C
TPR_12
Motif
Other DBs
NCBI-GeneID:
119095638
NCBI-ProteinID:
XP_037074397
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MSVYFDRYIDDQQRGVLKVGLEWHRVAPLVAVSWYSEQQGGGVSLYNDEGDLVPGLSVPA
SSTQVTAIVWHPIKKVLLLGWETGVLQTWSEHDRALTDIQSLHKSPVTLAMWSAAGGRLI
TADTSGTLVGWKGDGQCNVTVVFQHDLKDPLTQLVYRSVEEHHQQQPSVDLGGLAKAAVS
GDEVALDMFSSWRPKTSSTRFLVARQENLNLFVGSASGIIYYITESGNCMEVLQADGAIR
FLLFYEGKEELVVVTETMVLGEFQVEYDGTLTEITKVKLSGRNQDMQLSWAGPGVLAVAT
GEPHIRLWDLDKGDNYAVRLDGHYFNEQDAVLSLAFCPGKAVLAAGTSMGKVAFYKYFKV
EKDEEHNWHVQYVATVSGPAKMCRWGSTKNLLAVNTVKDVVILREHQMCTHFNDMVSAVQ
VSPTQLSIDIFTTKQHMELKSDIQIQGTFVAVDQVVIWSGRRVVVYEFSPDAQHARVVGS
FESTCEMAALYETNLYLADQGNLVVTNFQGAVKQKIDFTDKEGEAMYIDINGTSMVVGSV
NGALKLFDLSRRELRSLANPKFISESVPDFGELIQCRVNCKGTKVSCLVAQSSLLPDPKV
YIWDVDTDAVSYFNFSSGREDEDDQRVPPNSATSTDSRELTVMERTKLESSRSVGGRFVV
NHFWEPSDARLFVCEAKLLPDTTKPPLSSTLLLNKTSSAQVRLQSELLIVSMFSTSESGV
VVQDWVPLGEQHSHVVGVAVPYFYLLLKLDSLILDADKDAGSSMYLTSNRPSQISTHVMR
DFQGLENADKPTKQAMMEFSYHLSVGNMDEAFKAIKTIKSQQVWENMARMCVKSKRLDVA
SVCLGNMGFARGARMLKIAQSEPELDARVAMLAVVLDMTEEAAHLYQRCGRWDLLNRLYQ
DTGEMEKAIELARTKDRIHLRHTFYRCAKTLEARGELQDAVPFYEQSETHRFEVPRMLFD
DTLALEQYATQTKDKGVKRWWAQYMESTGDMDTALEYYQAAEDYLSLARVYCYLNDLDKA
AKLANDTGDRAACYHLARQYENSDNIKEAIHFFTRAQAYGNAIRLCKENQFDDQMLNLAL
MAGPREQLDAARYFESLGKGGIERAVMLYHKAGLLTKATDLAFKHQQFNALQLIANDLTS
ECDPALLQKCAAFFIENGQFDKAVDMFAISKKYVEALDLCVEHNIPITDEVAERLTIPKG
EGTDDERSRVLLKVAECAYAQNNYVLATKKYTEAGDKVNAMKSLMKSGDTKRIIYFAQTS
RERDIYIMAANYLQSTDWQKSPEIMKSITTFYTKGKAYDLLAGFYDACAQAEIDEFHDYD
KALSALTEAYKSFSKSQQGNTGELDNRGANLREKIELVKKFVTIRGHFQVNPDESMVAAR
DFANELRNDEAVRRGDLYAMIVEYLARQQKYEMAYKAIEQMRQRCPGAQVGHHISEPVLL
AIQQAVGVQINRQSRGNLSGGGFDANIEISDDE
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtactttgaccggtacatagacgaccagcagcggggcgtgctgaaggtgggc
ctcgaatggcaccgcgtcgcgccgctggtggccgtcagctggtactccgaacagcagggc
ggaggcgtcagcctctacaatgacgagggtgatctggtgccgggcctctccgtgccggcc
tccagcacacaggtcaccgccatcgtctggcacccgatcaagaaggtgcttctgctcgga
tgggagactggagtgcttcagacctggagcgaacacgaccgggcgctgaccgacatccag
agtctgcacaagagcccggtcaccctggccatgtggagcgccgccggcggacggctcatc
actgctgacacgtcgggcaccctggtcggctggaagggcgacggccagtgcaacgtcacc
gtggtgttccagcatgacctgaaggacccgctgacccagctggtgtaccgcagcgtggag
gagcaccatcagcagcagcccagcgtcgacctcggggggctggccaaggcagccgttagc
ggagacgaggtggcgctcgacatgttcagctcgtggagacccaagacgtcgtcgacgcgc
ttcctggtcgcccggcaggagaacctcaacctgttcgtcggctcagcatccggcatcatt
tactacatcacggagtccggcaactgcatggaggtgctgcaggcggacggcgctatccgc
ttcctgctcttctacgagggcaaggaggagctggtggtggtgacggagacgatggtgctg
ggcgagtttcaggtcgagtacgacggcacactgacggagatcaccaaggtgaagctgtcg
ggccgtaaccaggacatgcagctgagctgggccgggcccggcgtgctggccgtggccacc
ggcgagccgcacatccggctctgggacctcgacaagggcgacaactatgccgtccggctc
gacggccactacttcaacgagcaggacgccgtcctctcactggccttctgcccgggcaag
gcggttctggctgccggcaccagcatgggcaaggtggccttctacaagtacttcaaggtg
gagaaggacgaggagcacaactggcacgtgcagtacgtggccaccgtcagcgggccggcc
aagatgtgcaggtggggcagcaccaagaacctgctggccgtcaacactgtgaaggacgtc
gtcatcctgcgggagcaccagatgtgcacccacttcaacgacatggtgtcggccgtgcag
gtgtcgcccactcagctctccatagacatcttcaccaccaaacagcacatggagctgaag
tcggacatccagatccagggcacgttcgtcgccgttgaccaggtggtaatctggagcggc
cgtcgcgtggttgtgtacgagttctcgccagacgcccagcacgctcgggtggtcggttcg
ttcgagtcgacctgcgagatggcggccctctacgagacgaacctctacctggccgaccag
ggaaacctggtcgtcaccaacttccagggtgccgtgaaacagaagatcgacttcaccgac
aaggagggagaagccatgtacatcgacatcaacggcacctcgatggtggtgggctcagtg
aacggcgccctcaagctgttcgacctctcgagaagagagctgagaagtttggctaacccg
aagttcatctcggagagtgtgcctgacttcggcgagctgattcagtgccgggtgaactgc
aagggcaccaaagtcagctgtttggtggctcagtcgtcgctgctgccagacccgaaggtg
tacatctgggacgtggacacagacgccgtcagctacttcaacttcagctcgggccgcgag
gacgaggacgaccagcgcgtgccgcccaactcggccaccagcaccgactcgcgcgagctg
actgtcatggagaggaccaagctggagtcgtcgcggagtgtgggcggtcggttcgtggtg
aaccacttctgggagccaagcgacgcgcggctcttcgtgtgcgaggccaagctgctgccg
gacactaccaagccgccgctgtcgtccacgctgctgctgaataaaacgtccagcgcgcag
gtccggctgcagagcgagctgctcatcgtgtccatgttcagcacgtcggagagcggcgtg
gtggtgcaggactgggtgccgctcggcgagcagcacagccacgtggtgggcgtggccgtg
ccctacttctacctgctgctcaagctcgactcgctcattctggacgcagacaaggacgcc
ggctcctccatgtacttgacgtccaaccggccgtcccagatctccacccacgtgatgcgc
gacttccaaggtctggagaatgctgacaagcctaccaagcaggctatgatggagttctcc
taccatctgagcgttggcaacatggacgaagccttcaaggccatcaaaaccatcaagagt
cagcaggtgtgggagaacatggcgcgcatgtgcgtcaagtccaagcgcctggacgtggcc
tccgtctgcctgggcaacatgggcttcgccagaggtgcacggatgctgaagatcgcccag
agtgagccagagctggacgcccgggtggccatgctggccgttgtgttggacatgacggag
gaggcggcgcacctgtaccagcgctgcggccgctgggacctgctcaaccggctgtaccag
gacaccggcgagatggagaaggccatcgagctggcgcgtaccaaggaccgcatccacctg
cggcacaccttctaccgctgcgccaagacgctcgaggccagaggggagctgcaggacgcc
gtgccgttctacgagcagtcggagacgcaccgcttcgaggtgccccgcatgctgtttgac
gatacgctcgcgctggagcagtacgccacacagaccaaggacaagggagtgaagcgctgg
tgggcccaatacatggagtcgacgggcgacatggacacggccctcgagtactaccaagcg
gccgaggattacctgtcgctggccagggtctactgctaccttaacgacctggacaaggcg
gccaagctggccaacgacaccggcgacagggcggcctgctaccacttggcgcgccagtac
gagaactccgacaacataaaggaggcgatccacttcttcacgcgcgcacaagcctacggc
aacgccatccgactgtgcaaggagaaccagttcgacgatcagatgctgaacctggcgctg
atggccgggccgcgcgagcagctggacgccgcgcgctacttcgagtcgctcggcaagggc
ggcatcgagcgagccgtcatgctctaccacaaggccggcctgctcaccaaggccaccgac
ctcgccttcaagcaccagcagttcaacgctctccagctgatcgccaacgacctgacgtcc
gagtgcgacccggcgctgctgcagaagtgcgccgcgttcttcatcgagaacggacagttc
gacaaggccgttgacatgttcgccatctccaaaaagtatgtggaggcgctggacctgtgc
gtagagcacaacatacccatcacggatgaggtggccgagaggctgaccatccctaaaggc
gagggcactgacgacgagcgctcccgggtcctgctcaaggtggccgagtgcgcctacgcc
cagaacaactacgtcctggccaccaagaagtacaccgaggctggcgacaaggtcaacgcc
atgaagtcgctgatgaagtctggggacaccaagcggatcatctacttcgcccagacctcc
cgcgagcgcgatatctacatcatggcggccaactacctgcagtctaccgactggcagaag
agccccgagatcatgaagtccatcaccacgttctacaccaagggcaaggcttacgacctc
ctggccggcttctacgacgcctgtgcccaggcggagatagacgagtttcatgattacgat
aaggcgctgagtgctctgacggaggcctacaagagcttcagcaagtctcagcagggcaac
actggcgagctggacaaccgaggggccaacctccgcgagaagatcgagctcgtcaagaag
ttcgtcacaatccgaggacacttccaggttaacccggacgagtcgatggtggcggcgcgg
gacttcgccaacgagctgcgtaatgacgaggccgtgcggcgcggcgacctgtacgccatg
atcgtcgagtacctggcgcggcagcagaagtacgagatggcgtacaaggctatcgagcag
atgcgccagcggtgcccgggcgcccaggtggggcaccacatcagcgagccggtgctgctg
gccatccagcaggccgtcggcgtccagatcaaccggcagtcgcgcggcaacctgtccggc
ggcggcttcgacgccaacatcgagatctccgacgacgagtga
DBGET
integrated database retrieval system
