Pollicipes pollicipes (gooseneck barnacle): 119095855
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Entry
119095855 CDS
T08250
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119095855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119095855
03009 Ribosome biogenesis [BR:
ppoi03009
]
119095855
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119095855
Spliceosome [BR:
ppoi03041
]
Complex A
U1 snRNP components
U1 related factors
119095855
Complex B
119095855
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
Pre-60S particles
Helicases
119095855
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Clathrin
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
119095855
NCBI-ProteinID:
XP_037074600
EnsemblRapid:
LOC119095855
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MFGGFGSSFGGGRPSMKGSQPGGNLRRPDWTQIKLTPIQKDFYQPLPHVVARGQSEVEAY
RQRSEITVRGSTVPAPLIEFHDLAMPDYILNTIRANGFTTPTPIQAQGWPIALSGKDMVG
IAQTGSGKTLAYMLPAIIHINHQDYLRPGDGPVALVLAPTRELAQQISEVASEFGRSSKL
RHTCVYGGAPKGGQLRDLERGVEIVIATPGRLIDFLEMGKTNLRRTTYLVLDEADRMLDM
GFEPQIRKIVEQIRPDRQTLMWSATWPKEVRRLAEEFLVDYTQLNVGSLDLAANHNILQI
VDVCESHEKFQKLFRLLEEIMAEKENKTIIFTETKRGSDELTRQMRREGWPGMCIHGDKS
QQERDWVLREFRSGRSPILVATDVAARGLDVTDIKFVINFDYPNNSEDYIHRIGRTARSH
NTGTAYTFFTPENAPKARDLIAVLREANQVVNPKLVELQSSSRGYGGRSRYGGGRGFGGG
GGRRSGGAYGGGGRW
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtggctttggcagcagtttcggcggcggccggccgtcgatgaaaggctcccag
ccaggcggtaacctgcgccgccctgattggacccagatcaagctgacacccattcaaaaa
gacttctaccagccactgccacatgtggtggcgcgcggccagtcggaggtggaggcctac
cggcagcgcagcgagatcaccgtgcgcggctcaacggtgccagcgccactcatcgagttc
cacgacctggccatgcccgactacattctgaacacaatcagggccaatggtttcaccaca
cccacaccaatccaggcccagggctggccaatcgccctctccggcaaggacatggtgggc
atcgcacagaccggctctggcaagacgctggcatacatgctgcctgccatcattcacatc
aaccaccaggactacttgcgtccgggcgacgggccggtggcgctggtgctggcgcccacc
cgcgagctggcccagcagatctccgaggtggccagcgagttcggccgcagctccaagctg
cgccacacctgcgtttacggcggcgcgcccaagggcggccagctgcgtgacctggagcgc
ggcgtcgagatcgtgatcgccacgcccggccggctgatcgacttcctggagatgggcaag
accaacctgcggcgcaccacctacctggtgctggacgaggccgaccgcatgctcgacatg
ggcttcgagccgcagatccgcaagatcgtggagcagatccggcccgaccggcagacgctc
atgtggagcgccacctggcccaaggaggttcgtcgcctggcggaagagttcctggtggac
tacacccagctgaacgtgggctcgctcgacctggcggccaaccacaacatcctgcagatt
gtggacgtctgcgagagtcatgaaaagttccagaagctgtttcgcctgctggaggagatc
atggccgagaaggagaacaagaccatcatcttcacggagacgaagcgcggctccgacgaa
ctgacgcgccagatgcgccgcgagggctggccgggcatgtgcatccacggcgacaagtcg
cagcaggagcgcgactgggtgctgcgcgagttccgcagcggccgctcccccatcctggtg
gccaccgacgtggccgcgcgcggcctggacgtgaccgacatcaagttcgtcatcaacttc
gactacccgaacaactcggaggactacatccaccggatcgggcgcacggctcgcagccac
aacaccggcacggcctacacgttcttcacgcccgagaacgcacccaaggcgcgcgacctg
atcgccgtgctgcgcgaggccaaccaggtggtgaaccccaagctggtggagctgcagagc
tcgtcccgcggctacggcggcagaagccggtacggcggcggccgcggcttcggcggcggt
ggcggccgccgctcgggaggcgcgtacggcggtggcggccgttggtag
DBGET
integrated database retrieval system
