Pollicipes pollicipes (gooseneck barnacle): 119096339
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Entry
119096339 CDS
T08250
Name
(RefSeq) collagen alpha-2(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04382
Cornified envelope formation
ppoi04512
ECM-receptor interaction
ppoi04518
Integrin signaling
ppoi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119096339
04518 Integrin signaling
119096339
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119096339
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119096339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppoi04147
]
119096339
00536 Glycosaminoglycan binding proteins [BR:
ppoi00536
]
119096339
Exosome [BR:
ppoi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119096339
Glycosaminoglycan binding proteins [BR:
ppoi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119096339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119096339
NCBI-ProteinID:
XP_037075080
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MERVRAPLLLLGLLVGVLSCVVVLAEPQQQQQQYSPQRRGDNYGYGFYQTRDGQTDIEPR
PLGDRRCGAGGCGAGGCKCVGEKGSRGAPGAQGPSGVKGQQGFPGMEGLPGPKGDKGSGG
PQGPRGLQGDRGKMGMPGFPGINGIPGLPGGPGPRGFPGLDGCNGTDGPPGFPGTPGPAG
PPGFPGVPGTKGNKGEAARLPGPDVRGQKGEPGRDGSRGVPGQPGDIGFPGEKGDRGPRG
PAGVSGRPGVSGQKGEMGLGLVGPPGEKGESGPPGPPGFRPGPEQVGPNCSTIEVLPGPR
GERGSKGDKGMAGPPGPAGNNGLPGLPGDTGMKGEKGLSGLPGPRGRDGQFGPPGPQGFK
GDQGVPGLDGQDGFPGQKGGPGPAGQDGVRGLPGPRGAPGGGPGGPPGDKGVPGFPGSPG
PRGEDGRPGIPGARGPEGPAGGIGLPGLPGPEGLPGVKGDTGPAGLDGLPGPIGPPGLPG
QRGPAGRPGAPGEKGVSIEGAPGLDGAPGRDGQPGQKGERGYTGPPGAPGDTIDGIPGRT
GLPGRPGEKGRDGQSGRPGIPGLPGFKGEAGRQCDQCLQCPVGEKGEPGLDGLPGPAGLR
GPEGPPGLAGAPGEDGLPGPMGLPGKEGESGVPGLAGLKGAKGEDAFVPPDLIRGPKGAK
GDRGLPGLPGQEGRPGQSGRPGQPGPSGLPGVKGDKGSRGFPGDRGRDGIPGADGLPGLS
IKGEPGQPGDSGQPGLPGRQGLPGRKGEPGRFDTAAPQTIGPKGRKGERGFDGPPGLPGL
KGDKGERGLTGRDGEPGPAGPAGPRGPRGLPGPRGEKGVLGPDGSSGRPGQDGLPGLAGE
PGERGFKGEAGLPMPGPPGQPGLPGRKGETGPSGGSGLPGQPGDAGPPGFPGLKGDAGVP
GLSGLPGLDGEKGNPGFPGPEGTQGVAGPPGSDGPKGEPGLRGDDGRPGLPGFPGPKGQA
GQPGLPGIKGLPGRDGLDGASGLPGQDGLPGLPGTKGEAGFPGPVGPAGEPGQPGLDGLP
GIKGDPGRSGLPGQPGQRGLPGSKGEMGLPGFPGAKGVPGRVSEKGERGVRGLPGARGPP
GLDGLPGGPGRDGDKGNAGFGTPGLPGLKGERGPQGLPGLDGRPGQKGDAGLPGFPGQKG
DRGLDGQPGTPGAPGLDGAPGLKGEGGPAGLPGRPGLPGLKGGIGFPGLDGEKGEPGPEG
PSGQPGLPGLDGAKGEAGLPGQPGVPGLKGGRGLDGLKGQTGEPGFPGPAGPLGPAGDKG
DRGFPGPRGLPGLDGLPGQKGEVGPVGPEGLPGFGVKGEKGLPGQPGNNGRPGPEGPSGP
KGDKGFVGLPGLRGLPGQPGPVGPQGEKGDSGLPGLPGQDGEDGRPGQTGFPGPSGLPGL
KGDRGLPGTPGASGLKGAIGPPGTNGQDGRPGQPGDKGDSGLPGLPGQPGSPGLRGDDGL
PGPAGPVGPPGLDGLKGEPARDGLPGQKGEMGLRGLPGRDGPPGLPGQDGPAGLPGQKGE
LGRPGLDGLPGLPGPQGQKGNPGMEGLRGFEGNPGPQGVKGAMGRPCTAAPDYLTGILLV
RHSQTASVPQCEAGHTELWQGYSLLYIEGNEKAHHQDLGFAGSCVRRFSTMPFMFCDMNN
VCNYASRNDKSYWLSTNAPIPMMPVADTAIRQYISRCVVCEAPANVIAVHSQSLNIPECP
FGWSGLWIGFSFAMHTAAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGTCHYFANKFS
FWLATINDPDQFNRPRSETLKSGNLRSRVSRCQVCIKIT
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgtcagagcgcccctgctgctgctcgggctgctagttggagttttatcctgc
gtagttgtactggccgagccgcagcagcagcagcaacagtattcgccgcagcgccgcggc
gacaactacggctacggcttttaccagacaagggacggccagacggacattgagccgcgg
ccgctaggcgaccgtcggtgcggcgccggcggctgcggtgccggcggctgcaaatgcgtc
ggcgagaagggcagcaggggagcgccgggagcccaggggccctctggcgtcaagggccag
cagggattccccggcatggagggcctgcccggcccgaagggagacaaaggatccggcggt
ccgcagggacccaggggtctgcagggagatcggggcaagatgggcatgcctggcttcccc
ggcatcaacggcatcccaggcctgccaggcggtcccggtccgcgaggcttccctggactg
gacggctgcaacggcaccgacggaccgcccggcttccccggcaccccaggcccggccgga
cctccgggcttccctggcgtaccaggaactaaaggcaacaagggcgaggcggcacgcctg
ccgggaccggacgtgagaggtcagaagggcgagccgggccgtgacggcagccgcggcgtg
cccggccagcccggcgacatcggcttccccggcgagaagggcgaccggggacctcgcggc
ccagctggtgtgtcgggtcgacccggcgtgtccggccagaagggcgagatgggcctcggc
ctggtggggccgcccggcgagaagggggagtcggggccgccggggccgcccggcttccgg
cccggtcccgagcaggtcgggcccaactgcagcacgatcgaggtgctgcccggcccccgg
ggcgagcggggcagcaagggagacaagggcatggcagggccacccggaccggcgggcaac
aacggactgcctggcctgcccggtgacacgggcatgaagggcgagaaaggactgagcgga
ctgcccggacctcggggtcgcgacggccagttcggcccgccagggccgcagggcttcaag
ggtgaccagggcgtgcccggcctcgacggccaggacggcttccccggccagaagggaggt
ccgggcccggccggccaggacggcgtgaggggcctgccgggcccgcgcggcgcacccggc
ggcggtcccggtggtccgcccggagacaagggcgtgcccggcttcccaggcagtcccgga
cccagaggcgaggacggtcgtccgggcattcctggagcgagaggaccggaggggccagcc
ggcggcatcggtctgcccggcctgcctggtcccgagggactgcccggcgtcaagggcgac
acggggccggctggactggacggtctgcccggtccgatcggcccgcccggcctgcccggc
caacggggcccggccggccggcccggcgcgcccggcgagaagggcgtctccatcgagggg
gcgcccggtctggacggcgcgcccggccgcgacggccagccgggtcagaagggcgagcgc
ggctacacgggaccgccgggcgcgcccggcgacaccattgacggcatcccaggccggacc
ggtctgcccggccggccgggggagaagggtcgcgacggccagtcgggccggcctggcatc
cccggcttgcccggcttcaagggcgaggccggccgccagtgcgaccagtgcctgcagtgt
ccggtcggcgagaagggtgagccgggcctggacggcctgcccgggccggctggcctgcgt
ggaccggagggcccgccgggcctggccggagcgcccggcgaggatggattgccaggaccc
atgggactccccggcaaggagggtgaatcaggcgtccccggcctggcaggcctgaaggga
gctaagggcgaagacgccttcgtgccgccggatttgattcgtggccccaagggcgccaag
ggtgacaggggcctgcccggcctgccgggccaggagggccggccgggccagtcgggccgc
cccggccaaccgggcccgtccggcttgcccggcgtcaagggtgacaagggcagccgcggc
ttcccgggcgaccgcggtcgtgacggcataccgggcgcggacggtctgcccggcctgagc
atcaagggcgagccgggccagcccggcgacagcggccagcctggactgcccggcaggcag
ggactgcccggccgcaagggcgagccaggccgatttgacacggcagcgccgcaaacgatc
ggaccgaagggccgcaagggcgagcgaggcttcgacggaccgcccggccttcccggcctg
aagggcgacaagggcgagcgcggtctgactggcagggacggtgaaccgggtccggccggg
ccggccgggccgcgcggcccacgcggtctgcccgggccccgcggcgagaagggcgtactg
gggccggacggctcgtccggccggcccggccaggacggcctgcccggtctggccggcgaa
ccgggcgagcgcggcttcaagggcgaagccggcctgcctatgcccggtccacccggtcag
ccaggactgcccggccgcaagggcgagacgggcccctccggtgggtccggtctgcccggc
cagccgggcgacgctggtccgcccggcttccccggcctgaagggcgacgctggcgtcccc
ggattgtctggcctgcccggactggacggcgagaagggcaaccctggattcccgggcccg
gagggcacgcagggagtggccggaccacccggcagcgacggacctaaaggcgagcccggg
ctgaggggtgacgacggccggccgggcctgcccggcttccccggaccgaagggccaggca
ggtcagcctggactgcccggcataaagggtctgcccggccgcgacggcctggacggcgcc
tccggtctgccaggacaggatggactgcccgggctgcccggaacgaagggcgaagccggc
ttcccgggtccggtcggaccagccggagagccgggccagccgggtctggacggcctgcca
ggcatcaagggtgacccgggccggtccggcctgcccggccagcccggccagcgcggcctg
cccggcagcaagggcgagatgggtctgcccggcttccccggggccaagggcgtgcctgga
cgcgtctccgagaagggcgagcgtggcgtgcgcggcctgccgggcgcgcgcggcccgccc
ggcctcgatggtctgcccggcggccccggacgcgacggcgacaagggcaacgcgggcttt
ggcacgccaggcctgccgggcctaaagggcgagcgcggaccgcagggtctgcctggcctg
gacggcagacccgggcagaagggagacgccgggctgcccggcttccccggacagaaggga
gatcgcggcttggacggacagccaggaacgcccggagcgcctggcctggacggcgcgccg
ggcttgaagggggagggaggaccggccggcctgcccggtcgtcccggcctgcccggcctc
aagggcggcatcggcttccccggactggatggagagaagggcgagcccgggccagaggga
cccagtggccagccgggtctgcccggactggacggcgcgaagggagaggctggccttccc
ggacagccgggcgtgcccggtttgaagggaggccgtggtctggacggcctcaagggccag
acgggcgagccgggcttccccggtcctgccggaccgctggggccggcgggcgacaagggt
gaccgcggcttccccggtccgcgcggcctgcccggcctggatggtctgccgggccagaag
ggcgaggtgggaccagtgggaccagagggcctgccaggcttcggcgtcaagggcgaaaag
ggcctgcccggacaacccggcaacaacggacggcccggccccgagggcccgtcgggcccc
aagggcgacaaaggcttcgtgggcctgccgggcctgcgcggcctgcccggccagcctgga
ccagtgggaccgcagggcgagaagggtgactcgggcctgcccggtctgcccggccaggac
ggcgaggacggccggcccggccagaccggcttccctggcccgtccggcttgcccggcctg
aagggagaccgcggcctgcccggcacgcccggcgcgtcaggactcaagggcgccatcgga
ccgccaggaaccaacggccaggacggccggcccggacagcctggcgataagggcgactcg
ggcctgcccggtctgcccggccagcccggctctcccggtctgcggggcgacgacggcctg
ccgggtccggccggtcccgtcggcccgccgggtctcgacggcctgaagggcgagccggcc
cgcgacggactgcccggccagaagggagagatgggcctgcgtggtctgcccggccgcgac
ggcccgcccggcctgcctggccaggacggccccgccggcctgcctggtcagaagggcgag
ttgggccggcccggactggacggcctgcccggactgcccggaccgcagggacagaaggga
aatccaggaatggagggacttagaggatttgagggcaacccaggcccgcagggcgtcaag
ggcgccatgggccgcccgtgtacggcggcgcccgactacctgaccggtatcctgctggtg
cggcacagccagacggcaagtgtgccgcagtgtgaggcgggtcacactgagctctggcag
ggctattcgctcctctacatcgagggcaacgagaaggctcaccaccaggacctgggcttc
gccggctcctgcgtgcgccgcttcagcaccatgcccttcatgttctgcgacatgaacaac
gtctgcaactacgccagccgcaacgacaagtcctactggctgtcgaccaacgcgcccatc
ccgatgatgcctgtggcggacaccgccattcgtcagtacatctccagatgcgtggtctgc
gaggcgccggcgaacgtgatcgccgtacacagccagtcgctcaacattcccgagtgtccg
ttcggctggagcggcctctggatcggattctcgttcgccatgcacacggcggccggcgcc
gagggtggcggccagtcgctctcctcgcccggctcctgtctggaggacttccgcgccaca
cccttcatcgagtgcaacggcgcgcgcggaacgtgccactacttcgccaacaaattctcc
ttctggctggccaccatcaacgacccggaccagttcaaccggccgcgcagcgaaaccctg
aagtcgggcaacttgcgctcgcgtgtgtcgcgctgccaggtctgcatcaagatcacgtag
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