Pollicipes pollicipes (gooseneck barnacle): 119096423
Help
Entry
119096423 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119096423
03016 Transfer RNA biogenesis [BR:
ppoi03016
]
119096423
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119096423
Spliceosome [BR:
ppoi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119096423
Transfer RNA biogenesis [BR:
ppoi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
119096423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119096423
NCBI-ProteinID:
XP_037075221
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MAAFEELGIMPEIGEAVSELEWLLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCMPI
LQIVWETLKRLQEGGRQRRGGAGPGRXDPGWRMSLRDRGDLLAVTPDGLRCQCREQRAWH
GGRATRAPCRAGRWYYEATVTDEGLCRVGWSTRQASLELGTDRGGYGFGGTGKKSNNRQF
DDYGEPFGKDDVIGCFLDLDGLQIRFSKNGGDLGSAFDVTKQAASEGLFPAVVLKNAEMA
FNFGDAPFKHPPGDGYQAVSAVPEQDTVTNAASAAPASKRVYAKNAPQAIVLEPSRELAE
QTLRQIQLFKKHLKPPAVREALLIGGVPAREQREQVQGGVDIVGATPGRLEDFINNGDVR
VDACRFLVLDEADGLLTQGHEKMIGRLHAAIPQVTPDGHRLQMVVCSATLHSFEVKRMAD
KLMHFPTWVDLKGEDAVPETVHHVLCMVDSRTDASWAALERRVQTDMVHAQDAVRAGSGS
AETLSEAVKLLKAEYCLRAIDVHKMDRALIFCRTKLDCDNLERYLMQRGGGPRRADNPYS
CVCLHSDRSVAERKDNLERFKRQQVRFLICTDVAARGLDITGLPFMINVTLPDEKTNYVH
RIGRVGRADRMGLAVSLVSAVPEKVWYHGCPSRGKSCMDTRLTERGGCCIWYDEPRLLAD
IEDHLGVTIPQIGTDLRVPVNEFDGRVVYGERRQAAGSGYQDHVQQMASSVRELASLETQ
AQTLFIRRHLHRLAA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttcgaggagttgggcatcatgccggagatcggcgaggccgtcagcgagctg
gaatggctgctgccgacggacgtgcaggccgaggccgtgccgctcatcctcggcggcggt
gacgtgctcatggccgccgagacgggctccggcaagacgggcgccttctgcatgcccatc
ctgcagatcgtctgggagacgctgaagcgactgcaggagggcggcaggcagcggcgcggc
ggcgccggccccggccgcnncgacccgggttggcgcatgtcgctgcgggaccgcggagac
ctgctggccgtcacgcccgacggcctgcgctgccagtgccgcgagcagcgcgcctggcac
ggcggccgcgccacgcgcgccccctgccgcgccggacgctggtactacgaggccacggtg
acggacgagggcctctgtcgcgtcggctggtccacgcgccaggcatcgctcgaactgggc
accgaccgcggcggctacggcttcggcggcaccggcaagaagtccaacaaccgccagttc
gacgactacggcgagcctttcggcaaggatgacgtcattggctgctttttggacctggac
ggcctgcagatccgcttctccaagaacggcggggacctggggtcggcgttcgatgtgacg
aagcaggcggccagcgagggcctcttccccgccgtcgtgctcaagaacgccgagatggcg
ttcaacttcggcgacgcgccgttcaagcacccgccgggcgacgggtaccaggcggtgagc
gctgtccccgagcaggacaccgtcaccaacgccgcgtcggccgcgcccgcctccaagcgc
gtgtacgccaagaacgcgccgcaggcgatcgtgctggagccgtcacgggagctggctgag
cagacgctgcgccagatccagctgttcaagaagcacctgaagccgccggccgtgcgcgag
gcgctgctgatcggcggcgtgccggcgcgcgagcaacgcgagcaggtgcagggcggcgtg
gacatcgtgggggccacgcccggccggctggaggacttcatcaacaacggcgacgtgcgc
gtggacgcgtgccgcttcctggtgctggacgaggcggacggcctgctgacgcagggccac
gagaagatgatcggccggctgcacgcggccatcccgcaggtgacgcccgacggccaccgg
ctgcagatggtcgtctgctccgccacgctgcactcgttcgaggtaaagcgcatggctgac
aagctgatgcacttccccacgtgggtcgacctcaagggcgaggacgccgtgccggagacg
gtgcaccacgtgctgtgcatggtcgactcgcgcacggacgcctcctgggcggcgctggag
cggcgcgtgcagaccgacatggtgcacgcgcaggacgccgtgcgcgccggctccggttcg
gcggagacgctctccgaggcggtgaagctgctcaaggccgagtactgcctgcgcgccata
gacgtgcacaagatggaccgggcgctcatcttctgtcgcaccaagctcgactgcgataat
ctggagcgctacctgatgcagcgcggcggcggcccgcggcgcgccgacaacccctactcg
tgcgtctgcctgcacagcgaccgcagcgtggccgagcgtaaggacaacctggagcggttc
aagcggcagcaggtgcgcttcctgatctgcacggacgtggcggcgcgcggcctcgacatc
accggcctgccgttcatgatcaacgtcacgctgcccgacgagaagaccaactacgtgcac
cggatcggccgcgtgggccgcgccgaccgcatgggcctggcggtgagcctggtgtcggcc
gtgccggagaaggtgtggtaccacggctgcccgtcgcgcggcaagagctgcatggacacg
cgactgacggagcgcggcggctgctgcatttggtacgacgagccgcgcctgctggccgac
atcgaggaccacctgggcgtcaccatcccgcagatcggcacggacctgcgcgtgcccgtc
aacgagttcgacggccgcgtggtgtacggtgagcggcgccaggcggccggctccggctac
caggaccacgtgcagcagatggcgtcgtcggtgcgcgagctggcctcgttggagacgcag
gcgcagactctcttcatccggcgtcacctgcaccggctggcggcctga
DBGET
integrated database retrieval system
