Pollicipes pollicipes (gooseneck barnacle): 119096437
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Entry
119096437 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119096437
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119096437
Spliceosome [BR:
ppoi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119096437
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
119096437
NCBI-ProteinID:
XP_037075244
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MALQMQADGDKERWSKVPPLQKNFYKEDPAVAAMPDDEVARGPVRRRHRASRDACAASPS
PLSPRSAEMNDVHVSCDEKDAPLPNPVTTFEQAFAAYPEILDELXQGGFEKPTPIQAQGW
PVLLSGQDMIGIAQTGSGKTLAFLLXALIHTDLQPIPREERGGPNVLVLAPTRELALQTE
KEVQLQGIRSVCVYGGGDRRTQVKAVCSGVEIIIATPGRLNDLVQAGFIDVTSVTYLVLD
EADRMLDMGFEPEIRKVLLDIRPDRQTVMTSATWPVDVRRIADKYMQTPIHVVVGTLDLP
GLPHTRRTDHRLCRDEEEKKEKLDEYLYNMGPDEKIIVFFRPEGGARDRHRGTCSRAPCR
VLFATDVASRGIDIADVTLIVNFDFPRHIEDYVHRVGRTGRAGKTGRAVTFMVREDWRHA
AELIEILQKNQAEVPDWLVEMSERFSRMKERRAAEGGDGERRGRGGRGRPGGEHSAQDLE
LSSDGSGTHTSRSGGQRYFVAYPDAASAPEVAERERQR
NT seq
1553 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcagatgcaggcggatggcgacaaggagcgctggagcaaggtgccgcctctg
cagaagaatttctacaaggaggacccggccgtggcggctatgccggacgacgaggtggcg
cggggtccggtacgacgccgacaccgcgcatcgcgcgacgcctgtgccgcgtcaccgtcg
ccgctctcgccgcgcagcgccgagatgaacgacgtgcacgtgagctgcgacgagaaggac
gcgccgctgccgaacccggtgacgacgttcgagcaggcgttcgccgcctacccggagatc
ctggacgagctgngtcaagggggcttcgagaagccgacaccgatccaggcccagggctgg
cccgtgctgctctccggtcaggacatgatcggcatcgcgcagaccggctcagggaagacg
ctggcgttcctgctgnnggcgctgatccacacagatctgcagccgatcccgcgcgaggag
cgcggcggccccaacgtgctggtgctggcgcccacccgcgagctggcccttcagaccgag
aaggaggtacaactacaggggatccggagtgtttgtgtgtacggcggcggcgaccgacgc
acgcaggtcaaggccgtctgctccggggtcgagatcatcatcgccacgccgggccgactc
aacgacctggttcaggctgggttcattgacgtgacgtcagtgacgtacctggtgctggac
gaggcggaccgcatgctggacatgggcttcgagccggagatccgcaaggtgctgctggac
atccggcccgaccggcagaccgtcatgaccagcgccacctggccagtggacgtgcgccgc
atcgccgacaagtacatgcagacgcccatccacgtggtggtcggcacgctggacctgcca
ggcctgccgcacacccgtcgaacagatcatcgtctctgccgcgacgaggaggagaagaag
gaaaagttggacgagtacctgtacaacatgggacccgatgagaagattatcgtcttcttt
cggccggaaggaggagcgcgagatcgccatcgaggaacatgcagtcgggctccgtgccgc
gtgctgttcgccaccgacgtggcgtcgcgtggcatcgacatcgccgacgtcacgctgatc
gtcaacttcgacttcccgcgccacatcgaggactacgtgcaccgggtgggccggacgggc
cgggccggcaagaccggtcgggccgtgacgttcatggtgcgcgaggactggcggcacgcg
gccgaactcatcgagatactgcagaagaaccaggcggaggtgcccgactggttggtcgag
atgtccgagcggttcagccggatgaaggagcggcgcgcggccgagggcggcgacggcgag
cggcggggacgcggcggccgcggccggcccggcggcgaacacagcgcgcaagacctcgag
ctgagctccgacgggtccggcacccacaccagtcgctccggcggccagcgctacttcgtg
gcgtacccggacgccgcgtcggcgcccgaagtggcggagcgcgagcggcaacg
DBGET
integrated database retrieval system
