Pollicipes pollicipes (gooseneck barnacle): 119096777
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Entry
119096777 CDS
T08250
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119096777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119096777
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119096777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
119096777
NCBI-ProteinID:
XP_037075596
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MMDQTQDSPSTSQPGDSGSSLTFGEHQDVEAFSQASLREIMAVTKLSNEIPCDETFALYS
SFPAFKQIMDMEGKMCLELIRRVLSKYKIQGALSSRDLDEKFDLIVEANDQLLEKINGDL
DEAAGMKKRLDPVVQTVSASTDGPISGRWNVTTNRTVARSPSQTIRLMTANNIERPQLSF
KQRVDNTTAAFVPIITDKPHALRPLAVLLETDDQGLESFSHPYEFELERFQPPEWALRPA
SEPTPPSPADQAPVTMVTSPAGLEQLVKELSRESEVAVDLEHHSYRSYLGLTCLIQISTR
TRDYIVDALQLRGQLQPLNEVFANPNIVKVFHGADSDVEWLQRDCGLYLVHLFDTHQACK
VLAFPRLSLAYLLQHFCNVTADKRFQLADWRIRPLPENMVRYAQEDTHYLLYIYDRMRNL
LLEKGNEQKNLIRSVYTNSTLVCLKKYQKPVVRADSHVEMYRRSKKSFSNKQMAALAQLY
KWRDETARIEDESTQYVLPNHMLLQISELLPREMQGLLACCSPVPPLLRQNLAAVHKMVL
TARSLQHVIETRADPAILVEAPARSRDECNSVLHNRHDTSHLADGDRVNVPMLLCPGADD
SLDTSAAEEVPTPSARIKEAPDLDVFAPERVVTSSVGEDWISPYRRYLMMKESVGDEKVV
RRMAELTEMTPERAPRPAPRASPPPALEAVLPGLADQSSVKVALDQPEPKAPQTLRVSRK
DTIREAKKGRKAHKRKRDADGAEVAPPTIPLAEPGPPAAQRPRPAGQWTKEPAPPPPDPF
DYSSVDYSTFGRPASTARADKR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagacacaagatagtccctcaacatcccagcctggtgacagtgggtcatca
ctgacatttggtgaacatcaagatgttgaagcattttcacaggcttccctgagggaaatc
atggctgtcaccaagctgtcaaatgaaataccctgtgatgaaacatttgctctttactcc
agttttccagcatttaagcagattatggacatggaaggcaagatgtgcttggagctcatc
cgaagggtcttgagcaagtacaagattcagggggccctctccagtcgtgacctggatgag
aagtttgacctgatcgtggaagccaatgaccagctgctggaaaaaattaacggtgacctg
gacgaggcggccggcatgaagaaacggctggatccggtggtgcagacggtcagcgccagc
accgacggtccgattagcggccgctggaacgtcaccactaaccggacggtggcgcggtcg
ccctcgcaaacaatccgcctcatgacggcgaacaacatcgagcggccgcagctgagcttc
aagcagcgcgtcgacaacacgaccgcggcgttcgtgccgatcatcacggataagccacat
gcgctgcggccgctggccgtgctgctcgagacggacgaccagggcttggagagcttctcg
cacccgtacgagttcgagctggagcgtttccagccgccggagtgggcgctgcgccccgcc
tctgagccgacgccgccgtcgccggccgaccaggcgcccgtcaccatggtgacgagtccg
gccggcctcgagcagctggtgaaggagctcagcagggagagcgaggtcgccgtcgacctg
gagcaccacagctaccgcagctacctgggcctgacgtgcctcatccagatttcgacgcgc
acgcgcgactacatcgtggacgcgctccagctccgaggacagctgcagccgctcaacgag
gtgttcgccaatcccaacatcgtcaaggtgttccacggcgccgactcggacgtggagtgg
ctgcagcgcgactgcggtctgtacctggtgcacctgttcgacacgcaccaggcctgcaag
gtgctggccttcccgcgcctctcgctcgcctacctgctgcagcacttctgcaacgtgacc
gccgacaagcggttccagctggccgactggcggatcaggccgctgcccgagaacatggtg
cgctacgctcaggaggacacgcactacctgctgtacatctacgaccgcatgcgcaacctc
ctgctggagaagggcaacgagcagaagaacctcattcggagcgtgtacaccaacagcacg
ctcgtctgtctgaagaagtaccagaagccggtggtgcgagccgacagccacgtggagatg
taccggcgaagcaaaaagtcgttcagcaataaacagatggcagcactggcgcagctctac
aagtggcgcgacgagactgcccgcatcgaggacgagagcacgcagtacgtgctgccgaac
cacatgctgctgcagatctctgagctgctgccgcgcgagatgcagggcctgctggcctgc
tgcagccccgtgccgccgctgctgcgccagaacctggccgccgtgcataagatggtgctg
accgcgcgcagtctgcagcatgtcatcgagacgcgggcggacccggccatcctggtggag
gcgccggcccggtcacgtgacgagtgcaacagcgtgctgcacaaccggcacgacaccagc
cacctggcggacggcgaccgagtcaacgtccccatgctgctgtgtccgggggctgacgac
agcctggacacgtcggcggcggaggaggtcccgacgccgtcagccaggatcaaggaggcg
ccggatctggacgtgttcgcgccggagcgagtggtgacgtcatccgtgggagaggattgg
atcagcccctaccgccgctacctgatgatgaaggagagcgttggtgacgagaaggtggtg
cgtcggatggccgagctgaccgagatgacgccggagcgcgcgccgcggccggcgccgcgg
gcctcgccgccgccggcgctcgaggccgtgctgcccggcctagcggaccagtcgtcagtc
aaggtggccctggaccagccggagccgaaggcgccgcagacgctgcgtgtctcgcggaag
gacaccattcgggaggcgaagaagggccgtaaggcgcacaagcggaagcgggacgcggac
ggcgcggaggtggcgccgcccaccatcccgttggccgagccgggcccgccggcggcgcaa
cggccgcgccccgccggccagtggaccaaagagccggcgccgccgccgccagacccattc
gactactcgagcgtagactacagcacgttcggccggccggccagcacggcgcgcgccgac
aaacgg
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