Pollicipes pollicipes (gooseneck barnacle): 119096911
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Entry
119096911 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: RING finger protein nhl-1-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119096911
04121 Ubiquitin system [BR:
ppoi04121
]
119096911
Enzymes [BR:
ppoi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119096911
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119096911
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119096911
BRITE hierarchy
Motif
Pfam:
NHL
DUF5128
SGL
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
Golgin_A5
Mod_r
DUF4449
Motif
Other DBs
NCBI-GeneID:
119096911
NCBI-ProteinID:
XP_037075812
EnsemblRapid:
LOC119096911
LinkDB
All DBs
Position
Unknown
AA seq
1483 aa
AA seq
DB search
MESFDSLLTCCICLDRYRNPKLLPCQHSFCMEPCMEGLIDYVKRQVKCPECRAEHRIPYK
GIQEFPSNVTMQRFLDMYQTISGEMPDPTQGQVMERCQVCNEKEYLQPCAHCDKKVCPDC
KSAHVDVLKRELVRINNQVRRGLHRLQDIHQAVDKNANTVQQNCVAVRDEVENIGQRLIK
AIKDRTEYLKAEVDSHMSNEVRNLNTLKSNLEQEIANIESNSDLAEKHLNDNTEWDDCEL
SDAKDIFLKTVEFIRNFEHETPTGGDFRRPVRFSAVQDPNSLSKTLEHFGELNIGKKELP
EPAAGQGFGGGFPALMPPGASGPGLMRSKSDHRLVSQLRQQEERGYGGYGDESGRSSPVS
RRRFGERPERKASDGGLYGEDSAYDSPCERRHKYRSRFTRRNLDPDDDMESYRPEPHAPH
AAEAPKEKKKEREKVLDTDDATKGPLSGIARILDVPRVIQKMVEKEKGPKKKKEEPKSAA
PAPAKPAPTPAPAPWRRQKSEDDEISKIKKMNQEADARCASGATPAAAAAEPPAAAPRAT
SASRGSVERRSSQPAAPAPAPAPAAAPRPRLSREESGSETDDSSRRRAARVSRPASDTPI
SEWVNEPFETPSSVAARRKAAAESAPPAPAAPAAPAAPAVPATPAAPAAPAAPTPAAPSE
RPRRTPLRMPERRLSRSHSSESTSSESSDVQSPAGVADKRKAKRGSQPPTPASPGAPATP
PAPKTPPVAATPPAPGTPVDSEWLGAATPTASRTAAASGPSSAASTPTPGTPSSVGTPTP
GTPGSVGTPAPGTPGSVGTPTRPRFQSRFLGRAGTPKAEEAKESESSDESESESETESSS
ESESEEEEAPAPPLRPAAAPMTKTSIGPLLARSAHARSGSGDATTTPTASVASRPSRPST
SSGYAARRESGDYTPAAPATDRYASRYGGDAATEPKPYESRYGSRYGDYGQGNGLTRSRT
SSALDGRTAPTEDSYAAYAAKFSRPAASSRPTYDDYSSTSTPRYPSYTSRFLNRSKSSAA
LDAPEEAARPAGEAAAPGPAATVADGGRPDGTSRYALPAERRSWLARSGSSEQADERGSS
GGGSSPTASLRSSVQRQGSGDSGAASGEPANPTPGTGGTRSEALSSWAQYLKSKYGYKNG
KETSKDVGKVLPRSKSSHLLGLPGEALLDAAVQAAPRSSAQVAPSSPALSNTALLGPRSQ
YLQKGRLRFKIGTRGGGPGCFTWPRGIAVGPDNSIVVADSSNHRVQVFDQAGTFVKEFGQ
YGNGEAEFDCLAGVSVNRIGQFIISDRYNHRIQIFDPSGRFLRSFGQNGVMEGRFNYPWG
VTTDALGFIYVCDKENHRVQVFQSDGTFVGTFGSEGRSSGQLAHPHYIAVSATNRVVVTD
SNNHRVQVFDVNGKCLTTFGGEGGEEGKFKFPRGVAVDDQGYIVVGDSGNNRIQVFEPDG
TFLKAFGCWGSQDGEFKGLEGVAVMSNGNILVCDRENHRVQVF
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttcgactctctgctgacatgctgcatttgcttggaccgctaccgcaacccc
aagctgctgccatgtcagcactcattctgcatggagccctgtatggagggcctgatcgac
tacgtcaaacgacaggtgaaatgtcccgagtgccgcgcggaacaccggatcccgtacaag
ggcatccaggagttccccagcaacgtgacgatgcagcgcttcctggacatgtaccagacc
atctcgggcgagatgcccgaccccacccagggccaggtcatggagcgatgccaggtgtgc
aacgagaaggagtacctgcagccgtgcgcacactgtgacaagaaggtgtgccccgactgc
aagtccgcgcacgtggacgtgctgaagcgcgagctggtgcggatcaacaaccaggtgagg
cgcggcctgcaccggctccaggacatccaccaggcggtggacaagaacgccaacacggtg
cagcagaactgcgtggccgtgcgtgatgaggtggagaacatcgggcagcgcctcatcaag
gccatcaaggaccgcaccgagtacctcaaggccgaggtcgactcgcacatgtccaacgag
gtgcgcaatctgaacacgctcaagagtaacctcgagcaggagatcgccaacatcgagagc
aactcggacctggccgagaagcacctgaacgacaatacagagtgggacgactgcgagctg
agtgacgccaaggacatcttcctaaagacggtcgagttcatccgcaacttcgagcacgag
acgccgacgggcggcgacttccggcgtccggtgcgcttctcagctgtgcaggaccccaac
tcgctcagcaagacgctggagcacttcggcgagctcaacatcggcaagaaggagctgccg
gagccggcggcgggccagggcttcggcggcggctttccggcgctgatgccgcccggcgcc
tcggggccgggcctcatgcgcagcaagtccgaccaccggctcgtctcgcagctgcgccag
caggaggaacgcggctacggcggctacggcgacgagtccggtcgctcgtcgccggtcagc
cggcggcgcttcggcgagcggccggagcgcaaggccagcgacggcgggctgtacggcgag
gacagcgcatacgactcgccctgcgagcgacgccacaagtaccgctcccgcttcacgcgg
cgcaacctggatccagacgacgacatggagagctaccggcccgagccgcacgcgcctcac
gccgctgaagcacccaaggagaagaagaaagagcgcgagaaggtcctggacacggacgac
gccaccaagggtccgctcagtggtatcgcgcgcatcctagatgtgccgcgcgtcatccag
aagatggtggagaaggagaaggggccgaagaagaagaaggaggagccgaagtcggcggcg
ccggcgcctgcgaagcctgcccccacaccagcacccgcgccctggcggcggcagaagagc
gaggacgacgagatctccaagatcaagaagatgaaccaggaggcggacgcccgttgcgcg
tcaggcgccaccccggccgccgccgccgccgagcctccggccgccgcgccgcgcgccacc
agcgcgtcacgcggctccgtcgagaggcgctcttcgcaaccagcggctccggctccggcg
ccggctcctgcggcggcgccgcggccacgtctctcgcgcgaggagtcgggcagcgagacg
gatgactcgtcgcggcgccgcgccgcccgcgtcagtcgaccggcctccgacacgccaatc
tccgagtgggtgaacgagcctttcgagacgcccagctcggtggcggcgcgacggaaggcg
gctgccgagtcggcaccccctgcgcccgctgcgcccgctgcgcccgccgcgcccgccgtg
cctgccacccccgccgcccccgccgccccagcagcgcccaccccggccgcgccctcagag
cggccgcggcgcacgccgctgcgtatgcccgagcggcgtctgtcgcgctcccacagctcc
gagtcgacgtcatccgagtcgtcggacgtgcagtcgccggcaggcgtcgcagacaagcgt
aaggcaaagcgcggctcgcagccgccgacgccggcttctcccggcgcgccggccacgcca
ccggcgcccaagacgccgcccgtggccgccacgccgccggcgcctggcacgcccgttgat
tccgagtggctgggcgcagcgacgccgacagccagccggacggcggcagccagcgggccg
tcgtcggctgccagcacgcccactccaggcacgccgagctctgtcggcacgcccactccc
gggacgccaggctctgtcggcacgcccgctcccgggacgccgggctctgtcggcacgccc
actcgtccgcgctttcagagccgcttcctgggtcgcgccggtacacccaaggcggaggag
gccaaggagtcggagagcagtgacgagtccgaatccgagtcggagacagagtcgtcctcg
gagtccgagtcggaggaggaggaggcgccagcgccgccgctgcgaccggccgccgcaccc
atgaccaagaccagcattggcccgctgctggcgcgcagcgcgcacgcgcggagcggctcc
ggcgacgcgacgaccacgcccacggccagcgtggcgtcgcggccgagccggccgtcgacg
tcgtccgggtacgcggcgcgtcgcgagtctggcgattacacgccggccgcgcccgccacc
gaccgctacgccagccgctacggcggcgacgccgcgaccgagcccaagccgtacgagtcg
cgctacggctcgcgctacggcgactacggccagggcaatgggctgacgcgctcgcggaca
tcctcggcgctcgatggccgcaccgcgcctaccgaggactcgtacgccgcgtacgcggcc
aagttctcgcggccggcggcgagcagccggccgacgtacgacgactactcgtccacgtcc
acgccgcgctacccctcctacacgtcgcggtttttaaaccgaagtaagagctccgctgcg
ctagacgcgccggaggaggcggctcgcccggcgggcgaggccgccgcccccggcccggcc
gccaccgtcgctgacggcggccgacctgacggcacgtccagatatgcgctccccgccgag
cgccgatcttggcttgcccgcagcgggagctctgaacaggccgacgagcgagggagcagc
ggcggtgggtcctcgcccaccgcctcgctgcgctcgtcggtccagcgacaggggagcggc
gacagtggcgccgccagcggagagccggctaaccccacgccaggcaccggcggcacgcgg
tcggaggcgctcagcagttgggctcagtatctgaagagcaagtacgggtacaagaatggc
aaggagaccagcaaggacgtgggaaaggtcctgccgcgtagcaagtcctcgcacctgctg
ggtctgccgggggaggcgctgctggacgcggccgtccaggcggcgccgcggtcgtccgcc
caggtggcgccgtcgtcgccggccctctccaacaccgccctgctcggaccgcgcagccag
taccttcagaagggtcgcctcaggttcaagatcgggacgcgtggcggtggcccgggctgc
ttcacttggccgcggggcatcgccgtcggtcccgacaactcgatcgtcgtcgccgacagc
agcaaccaccgcgtgcaggtgttcgatcaggccggcaccttcgtcaaggagtttggccag
tacggcaacggcgaggccgagttcgactgtctggccggcgtgtccgtcaacaggatcgga
cagttcatcatatcggacagatacaaccaccggatccagatattcgacccgtccgggcgg
ttcctgcgctcgttcggccagaacggcgtgatggagggccgcttcaactacccctggggt
gtcaccacagacgcgctcggcttcatctacgtctgcgacaaggagaaccaccgcgtccag
gtgttccagtccgacggcacgttcgtcggcacgttcggctccgaagggcgcagctccggc
cagctggcgcacccgcactacatcgccgtcagtgccaccaaccgcgtcgtcgtcaccgac
agcaacaaccaccgcgtgcaggtgttcgatgtcaacggcaaatgcctgaccacctttggc
ggcgagggcggcgaggagggcaagttcaagttcccaaggggtgtcgccgtagacgatcaa
ggatacatcgttgtcggcgactcgggcaacaaccggatccaggtgttcgagcctgacggc
acgttcctgaaggcgttcggctgctggggtagtcaggatggcgaattcaaaggactggag
ggcgtcgccgtgatgtcgaacggcaacattctggtctgcgaccgcgagaaccatcgcgtg
caggtgttttga
DBGET
integrated database retrieval system
