Pollicipes pollicipes (gooseneck barnacle): 119097110
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Entry
119097110 CDS
T08250
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoi03009
]
119097110
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119097110
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
90S particles
Helicases
119097110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
PQQ_3
Motif
Other DBs
NCBI-GeneID:
119097110
NCBI-ProteinID:
XP_037076050
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MDTNDIFWKLTRGVRFGNKFRQGYKTTPDPAVQQQPKTHVQAQEFPVPNGIKKRKSSASS
EGSDDDGDNAVPLSSFQHRKKAAKAGPEPAADDPKPTAEKLRKLHRLHVLGTDVPAPVTS
FDDMSDRLGVQPQIVANLRAAGYFEPTPVQMQAVPVMLERREVLACAPTGSGKTAAYLVP
VLQHLRQPRNAGCRALVLAPSRELARQIALEASRLAAGTGLRVRCLDRARRRPDGAARPV
SAKYDLLVSTPNRLIFLLDAEPPLLSLRAVEWLVVDESDKLFEAGERGFREQLGRVYSAC
DSAQVRRALFSATFAHDVDQWCQLNLDNVVTVSVGQKNTASDVVEQELVFVGSEAGKLYA
FRNIMQKGLATPCIIFVQTKERAKELFRELIYDGVMVDVIHADRTQLQRDNVVKAFRAGR
VWVLICTELMGRGIDFKGVNLVINYDLPPSTTSYIHRIGRTGRAGRPGRAVSFFTSKDVP
SMRQLAHLVKNSGCEVPDYLLQVPRKSKKDRREMAVHPIRRDTIDTTPRFDRDRMARIKA
LKKAADKRRAAGEDGSQRAAPAGKKKRTGKKADKPAQNKGVGKAARKKTSGREGAGKVTA
TANGAASAAIKATKKRVVKTKSKTKASAGTTKKKPGKTNGVS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggataccaacgacatcttctggaaattaacccggggtgttcgcttcggaaacaagttt
cggcaaggttacaaaacaactcctgacccagctgtgcaacagcagccgaaaacacacgtc
caagcacaagaattcccagtgccaaatgggatcaagaagcggaagtcatccgcgtcgtcc
gagggcagcgatgatgacggtgacaatgctgtcccgctgtccagtttccagcacaggaag
aaggcggcgaaggccggacccgagccagccgcggacgacccgaagccgaccgctgagaag
cttcgtaagcttcaccgcctgcacgtgctgggcacggacgtgccggcgcctgtgaccagc
ttcgacgacatgagcgaccgtctgggagtgcagccgcagattgtggccaacttgcgcgct
gcaggctatttcgagccgacgccggtgcagatgcaggcggtgccggtgatgctggagcgg
cgagaagtgctggcctgcgcgcccaccggcagcggcaagacggcggcgtacctggtgcca
gtcctgcagcacctgcgtcagccgcgcaatgccggctgccgggcgctggtgctagcaccg
agccgcgagctggcgcgccagatcgcgctggaggccagccggctggcggccggcactgga
ctgcgcgtgcgctgcctggaccgcgcgcgccgccggccggacggcgccgcgcgtcccgtc
tcggccaagtatgacctgctggtgagcacgccgaacaggctcatctttctgctggacgcc
gagccgccgctgctctcgctgcgggccgtcgagtggctggtggtggacgagtcggacaag
ctgtttgaggccggcgagcgcggcttccgtgagcagctgggccgcgtgtactcggcgtgc
gactcggcgcaggtgcggcgcgcgctgttttcggccacgttcgcgcacgacgtggaccag
tggtgccagctaaacctggacaacgtcgtcaccgtgtcggtcggccaaaagaacactgcc
agcgacgttgtggagcaggagctggtgttcgtcggaagcgaggccggcaagctgtacgcc
tttcgcaatatcatgcagaagggtctggcgacgccctgcatcatcttcgttcagaccaag
gaacgcgccaaggagctgttccgcgagctgatctacgacggcgtcatggttgatgtcatt
cacgccgaccgcacacagctgcagcgcgacaacgtggtgaaggccttccgcgctgggcgc
gtctgggttctcatctgcacggagttgatgggccgcggcatcgacttcaagggtgtcaac
ctggtcatcaactacgacctgccgccgagcaccaccagctacatccaccggatcggccgg
acgggccgcgccggccggccgggcagggccgtctccttcttcaccagcaaggacgttccc
agcatgcgtcagctggcacacctagtgaagaactccgggtgcgaggtgcccgactacctg
ctgcaggtgccgcgcaagagcaagaaggaccgtcgcgagatggccgtgcacccgatccgt
cgggacaccattgacaccacgccccggttcgaccgtgaccggatggcgcgcatcaaggcg
ctgaagaaggcggcggacaagcgccgcgccgcgggggaggacggcagccagcgtgcggcg
ccggctggcaagaagaaacggaccggcaagaaggcggacaaaccggcacaaaacaagggc
gttggaaaagcggcgcggaagaaaacgagcgggagggaaggtgctgggaaagttacagct
accgcgaacggcgccgcgtcggctgccatcaaggcgacgaagaagcgggttgtgaagaca
aaaagtaaaaccaaggccagcgccgggacaaccaagaagaagccagggaaaactaatggg
gtgagctga
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