Pollicipes pollicipes (gooseneck barnacle): 119097141
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Entry
119097141 CDS
T08250
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119097141
03041 Spliceosome [BR:
ppoi03041
]
119097141
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119097141
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119097141
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119097141
mRNA cycle factors
Common to processing body (P body) and stress granule
119097141
Spliceosome [BR:
ppoi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119097141
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119097141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119097141
NCBI-ProteinID:
XP_037076092
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MNSIPNQNGIGLEQQFAGLDIRGGFPPPQAATRFVQPPHRMDGFDRTGNQAFTNFRGGAF
TRGAAAGRPAFGGGFDPRGPPPPMPPAFDRGFSRGGYGERDRDRDRWTGYGFSDRPANGF
GGRGGRFDRAGDFGFGDRRGGSNNWNSYGRNNNSRSGGSGVVRWGERQEDLHMNDRWKEP
NEADWTVPLLRDSRVEEELFKNTSTGINFDKYDDIPVDATGNDVPECINSFTELELTPII
IENIELAKYTTPTPVQKYAFPIILKSRDLMACAQTGSGKTAAFLVPLLNQIFMNGPQGNA
PPDAKQRPMGGRKKQFPLALVLAPTRELATQIYNEARKFSYRSHVRPCVVYGGADVGGQM
RDLERGCHLLVATPGRLVDMLERGKVGLDNCRYLVLDEADRMLDMGFEPQIRRIVELDTM
PPTKDRHTMMFSATFPKEIQRLAQDFLNDYIFLAVGRVGSTSENITQEIVWVEDDQKKSF
LLDLLSATQNKEGNGENAAESLTLIFVETKRGADNLEEYLYRYAGYPVTSIHGDRSQAER
ELALKNFRNGRCPILVATAVAARGLDIPHVKHVINFDMPSDIEEYVHRIGRTGRMGNVGL
ATSFFNENNRNLVRDLMELLTETKQTVPDWLENYSLEVHKSSGHGRRGGKRFGGGFGGRD
YRQQNRSGGYNKSNQGYNQSKMGGGGGGGGAFPAYGMPPMGGMYGYPMQMGGYGGAYAAA
PPHAAGGTDNTWWGN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtataccgaaccagaatggtatcggtcttgagcagcagttcgctggtctggat
attcgtggcggatttccgcctcctcaggcagcaacaagatttgttcagccaccacatcgc
atggatgggtttgatcgcactggtaaccaagcatttacaaattttaggggcggcgccttc
acccggggcgcggcagccggccggccggccttcggcggcgggttcgacccgcgcggcccg
ccgccacccatgccgccggccttcgaccggggcttcagccgcggcgggtacggcgagcgt
gaccgcgaccgcgaccgctggaccggctacggcttctccgaccgtcctgccaacgggttc
ggcggccgcggtggccgtttcgaccgcgccggcgacttcggcttcggcgatcggcgcggc
ggctccaataactggaacagctacggccgtaacaacaacagccgctccgggggcagtggc
gtggtgcgttggggcgagcgccaggaggacctgcatatgaacgaccgctggaaggagccc
aacgaggccgactggacggtgccgctgctgcgcgactcgcgcgtcgaggaggagctcttc
aaaaatacgagcacgggcatcaacttcgacaagtacgacgacatccccgtggacgccacc
ggcaacgacgtgcctgagtgcattaactcgttcaccgagctcgagctgacgcccatcatt
attgagaacatcgaacttgccaagtacaccacgcctacgccggtgcagaagtacgcgttc
ccgatcatcctcaagtcgcgtgacctgatggcgtgcgcacagaccggctccggcaagacg
gccgccttcctcgtgccgctactcaaccagatcttcatgaacgggccgcagggcaacgcc
ccgccagatgccaagcagcgtccgatgggcggccgcaagaagcagttcccgttggcgctc
gtgctggcgcccacccgcgagttggccacgcagatctacaacgaggcgcgcaagttctcg
taccgctcgcacgtgcggccgtgcgtggtgtacggcggcgccgatgtgggcggccagatg
cgcgacctagagcgcggctgccacctgcttgtggcgacgcccggccgcctggtggacatg
ctggagcgcggcaaggtcggcctcgacaactgccgttacctggtgctggacgaagccgac
aggatgctggacatgggcttcgagccgcagatccgccgaatcgtggagctggacaccatg
ccgcccaccaaggatcggcacaccatgatgttctcggccaccttccccaaggagatccag
cgcctggcgcaggacttcctgaacgactacatcttcctggcggtgggccgcgtcggttcc
acctcggagaacatcacgcaggagatcgtctgggtggaggacgaccagaagaagtccttc
ctgcttgacctgctgtcggccactcaaaacaaggagggcaacggcgagaacgcggccgag
tctctgacgctgatcttcgtggagacgaagcgcggcgctgacaacctggaggagtacctg
taccggtacgccggctacccagtcacctccatccatggcgatcgctcgcaggccgagcgg
gagctggcgctcaagaacttccgcaacggccgctgccctatcctggtggccacggcggtg
gcggcgcgcggtctggacatcccgcacgtaaagcacgtgatcaacttcgacatgccgtcc
gacatcgaggagtacgtgcaccggatcggtcgcactggccgtatgggcaacgtcggcctg
gccaccagcttcttcaacgagaacaaccgcaacctggtgcgcgacctgatggagctgctg
accgagaccaaacagacggtgcccgattggctggagaactactcgctggaggtgcacaag
tcttctggccacggtcgacgcggcggcaagaggtttggcggcgggttcggcgggcgcgac
taccgtcagcagaaccgcagcggcggctacaataagagcaaccagggctacaaccagagc
aagatgggcggcggtggcggcgggggtggcgccttccctgcctacggcatgccccccatg
ggaggcatgtacggatatccgatgcaaatgggcggatacggcggcgcttacgcggccgcg
ccgccgcacgccgccggtggcaccgacaacacttggtggggcaactag
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integrated database retrieval system
