Pollicipes pollicipes (gooseneck barnacle): 119097238
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Entry
119097238 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119097238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppoi04121
]
119097238
Enzymes [BR:
ppoi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119097238
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
HECT type E3
119097238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Arm
WWE_1
WWE_5
Motif
Other DBs
NCBI-GeneID:
119097238
NCBI-ProteinID:
XP_037076185
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MADSASADAGVDDCIARRLRSSAARRQRSHDRSDGSGSRRSASGSGQSAGGEHKRSSRSP
PTAARAEKRRRADTPPEREQEAKRRHRGGSGSGRKTVSRSPEPSTSGQQKPAARRRQEPA
GTRTGRGRSPGARRQRSADRGGPSAGPAASSGQQPASNTGSCTSSSGRRGSRAGGKVALG
GSMSAGAAAAEEDGDMGRLQALLEARGIPPHLLGALGPRMQQMLHRSMGSSSKIQQLVQG
LQATGDETQQLQAVIEMGQLLVMGNEETLAGFPIKQVVPPLIALLQMEHNFDIMNHACRA
LTYLMEALPRSTAVVVEAVPVLLQKLQVIQCMDVAEQGLTALELISRRHSKNLLQVGGIS
SCLMYVDFFSLPAQRAALAITANCCLSLTQDEFHLVSDNLHNLAERLTHQDKKTVESVCL
AFSRLVETFKTDPAKVKDIARHGLLTNVQRLLVASPPVISSSTFCEVTKMLRVLCSHCPE
IAVQLLSENIADTLCFLLVGNREQMELVSRNPEELYALMCLVGDLLPSLPTDGLFSVDQW
LFRIYPREYVQWQWRDDRSNWHNYSHADSFTVETANQAGDDEVQLDFMGRHYTIDFNTMR
QINEGTGTSRPIQRRTAHGPAGGGGAPLGASAPAAPSGADPRLAVLQANRPLYSGLVGTL
FSILYKVYSSCAGPAVRHMCLRAILRMVYFASPDMLKDLVGIQEVSSHLTGMLSSGDLKI
VVAALQLAEVLIQKLPEQCSIHFRREGVVYQINQLAADPTTPPPAAASAAGDEPTNLSLS
DVLKRKRTSKRSGNASRKSRQEEAPLAAPGATGTTLDTLSRAAAGSSRGGGGGGGGSAAR
GKAAAGGCAGGSRFQTSFLASLNPARWGRSASNSPLGDRGLSKDGLLSRASSSPSLSGSK
ERVRGWIRERAQQFIQQHFSGDTSGHTALMARLGGALQRLRQQPAAPRAALQEVGAVLRH
SDISPFEVLRSGLVRQLTAFLTDGEGSERERRLRTFLHVFAGCPAELADVVEPWLPGTEQ
TATLSALVAKLNACVTQVEQLVVKVHDVSETAGGPSGQSALKYFNQNQLKCNLQRQPDCS
NLRQWRGGPVKIDPLALVQAIERYLVIRGYGRIRDDEDDGSDDGDSDDDIDDTLAAVSIS
QGNNHKLQFIINDHVLPYNMTVFQAIQQFSQDPTDSDSELTVGSTHLFQRTHTIYYRPAP
EESSHGGRGSGSHAKKGKSGGSKHSGKRRDELWSDGVAPEPVCPLLAYLTPRLPDHVTVS
DPCLETLHLLRLLHALCRHYGSLYNMSRFVPLLPAQEFINSKVSAKANRQLQDPVIVMTG
NTPQWLQQIGLACPFLFPFDTRQLLFFTSTFDRDRALLRLIESSPELQAADSEDRIAPKL
ERKKRTVSRDDLVRQAEALMAELAGSRALLEVQYENEVGSGLGPTLEFYSQVSRELQRAD
AELWRGERYRPPPDITADKLAPSSSSSAADAAASDGVEYIHAPLGLYPSPVARSGKSGTI
TRLKAKYKFLGKLMAKALTDFRLLDLPLSVPFYKWLLRQERSMTLADVHQLDASLAATLS
QLAAVVRRRRQLEADPALGGEQRRAAVEALGVDGCSVEELGLDFTLPGHPGIELKRGGRD
EPVTIHNLDQYLKLLTHWLLFESVYRQMEAFREGFESVFPLENLGMFFPEEIDCLFCGSQ
ESPWDERSLSEAFKPDHGYTHDSPAIKRLVRVLTEFSHEQRRQFLSFVTGSPRLPVGGFR
ALSPPLTIVRKIVQSNESPDDFLPSVMTCVNYLKLPDYTSQEVMGERIATAVRDGRLSFM
LS
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctgctagcgcggacgcaggcgtcgacgactgcatcgcccgccgactccgt
tcgtcagccgcccgccgccagaggtcccacgaccgatccgacgggtccggctcgaggcgc
agcgcgtccggcagcgggcagagcgccggcggcgagcacaaacggtcgtctcgcagcccg
ccgacggcggcccgcgcggagaagcggcgacgcgccgacacgccgcctgagcgcgagcag
gaggccaagcgccgacacagaggcggtagcggcagcggtcggaagaccgtgtcccgctcg
ccggagccgtccacgagcggccagcagaagccagcagcccggcgccgtcaggagccggcc
ggcaccaggacaggtcgaggtcgttcgcccggcgctaggcgccagaggtcggcagacagg
ggcggcccctctgccggcccggcagcctccagcgggcagcagccagcctccaacacgggg
tcctgtaccagcagcagcggtcggcgtggctcgcgggccggcgggaaggtggcgctgggc
ggcagcatgtcggctggcgccgccgccgcagaggaggacggcgacatgggccggctgcag
gcgctgcttgaggcgcgcggcatcccgccccacctgctgggcgcgctggggcctcggatg
cagcagatgctacacaggagcatgggcagcagttcaaagatccagcagttggtgcagggc
ctgcaggccaccggggacgagacccagcagctgcaggccgtcatcgagatgggccagctg
ctggtcatgggcaacgaggagacgctggctgggtttcccatcaagcaggtggtgccgccg
ctcatcgcactgctccagatggagcacaacttcgacattatgaaccacgcgtgccgggcg
ctcacctacctgatggaggcgctgccgcgcagcacggccgtggtggtggaggcagtgccg
gtgctgctccagaaactgcaggtcatccagtgcatggacgtggccgagcagggtctcacg
gcgcttgagctcatcagccgccgccacagcaagaacctgctacaagtgggcggcatctcc
tcgtgcctgatgtacgtggacttcttctcgctgccggcgcagcgcgcggcgctcgccatt
acagcaaactgctgcctgtcgctgacgcaggacgagttccatctggtcagcgataacctg
cacaatctggccgagaggctgacacaccaggacaagaagactgtggagagcgtgtgcctg
gccttcagccggctggtggaaacctttaagacggacccggccaaggtcaaggacatcgcg
cgtcacggcctgctcaccaacgtgcagcgcctgctggtggcatcgccgccggtgatcagc
agctccacattctgcgaggtgaccaagatgctgcgcgtgctgtgcagccactgccccgag
atcgccgtccagctgctgtccgagaacatcgccgacacgctgtgcttcctgctggtcggt
aacagggaacagatggagctggtgtcgcgcaacccggaggagttgtacgcgctcatgtgc
ctggtgggcgacctgctgccgtcgctgcccaccgacggcctcttcagcgtcgaccagtgg
ctgttcaggatatacccgagggagtacgtgcagtggcagtggcgcgacgaccgcagcaac
tggcacaactactctcacgccgacagcttcacggtggagacggccaaccaggcgggcgac
gacgaagtgcagctggacttcatgggccgccactacacgatcgacttcaatacgatgcgc
caaatcaacgagggcacgggcacgtcgcggccgatccagcggcgcacggcgcacggtccg
gccggcggcggcggcgcgccgctgggcgcgtcggcgccagcggcaccgtccggagccgac
ccgcgcctcgccgtgctgcaggccaaccggccgctgtactccggcctcgtcggcacgctc
ttctccatcctgtacaaggtgtacagctcgtgcgccggcccggccgtgcgccacatgtgt
ctgcgcgccatcttgcgcatggtctacttcgccagccccgacatgctgaaggacctggtc
ggcatccaggaggtgtcctcccacctgacgggcatgctgtcgtcgggcgacctgaagatc
gtggtggccgcgctgcagctggccgaggtgctgatccagaagctgcccgagcagtgcagc
atccatttccgacgcgaaggggtcgtctaccagatcaaccagctggcggccgacccgacg
acgccgccgccggccgccgcctcggccgccggcgacgagcccaccaacttgagcctgagt
gacgtgctgaagcggaagcgcacctccaagcggtccggcaatgcgtcgcgcaagtcgcgt
caagaggaggcgccgctggcggcgccgggtgcgaccggtaccacactcgacaccctctcc
agagcggcggccggctccagccgcggcggtggcggcggcggcggcggctcggcggcgcgt
ggcaaggcggcggccggcggctgcgccggcggcagccgcttccagacatcgttcctggcc
agcctgaacccggcccgctgggggcgcagcgcctccaactcgccgctcggcgaccgaggt
ctttcaaaggacggcctgctgagccgcgcctccagcagccccagcctgtcgggcagcaag
gagcgcgtgcgcggctggatccgcgagcgcgcgcagcagttcatccagcagcacttctcg
ggcgacacgtcgggccacacggcgctgatggcgcggctgggcggcgcgctgcagcggctg
cgccagcagccggccgccccgcgcgccgccctgcaggaggtgggcgccgtgctgcgccac
tcggacatctcgccgttcgaggtgctgcgcagcggcctggtgcgccagctgaccgccttc
ctgacggacggcgagggcagcgaacgtgagcgccggctgcgcacgttcctgcacgtgttc
gccggctgcccggccgagctggccgacgtggtggagccgtggctgccgggcaccgagcag
acggcgacgctctcggcgctcgtggccaagctgaacgcctgcgtcacgcaggtggagcag
ctggtggtcaaggtgcacgacgtgtcggaaacggccggcggcccgtccggccagagtgca
ctcaagtacttcaaccagaatcagctcaagtgcaacctgcagcgtcagccggactgctcg
aacctgcgccagtggcgcggcggcccggtcaagatcgacccgctggcgctggtgcaggcc
atcgagcggtacctggtgatccgcggctacggccgcatccgcgacgacgaggacgacgga
tccgacgacggcgactcggacgacgacatcgacgacacgctggcggccgtcagcatcagc
cagggcaacaaccacaagctgcagttcatcatcaacgaccacgtgctgccgtacaacatg
acagtgttccaggccattcagcagttcagccaggacccgaccgactcggattcggagctg
acagtcggttccacgcacctgttccagcgcacgcacaccatctactaccggccggcgccc
gaggagagctcgcacggtggccgcggctcgggctcgcacgccaagaagggcaaaagcggc
ggcagcaagcacagcggcaagcggcgtgacgagctgtggtcggacggcgtggcgccagag
ccggtgtgtccgctgctggcctacctgacgccgcggctgcccgaccacgtcacggtctcc
gacccttgtctggagacgctccatctgctgcgcctgctgcacgcgctctgccgccactac
ggcagcctctacaacatgtcacgcttcgtgccgctgctgccggcccaggagttcatcaac
agcaaggtgtcggccaaggcgaaccggcagctgcaggacccggtgatcgtgatgacaggc
aacacgccgcagtggctgcagcagatcgggctcgcctgcccgttcctgttcccgttcgac
acgcgccaactgctgttcttcacgtcgacgttcgaccgggaccgggcgctgctgcgcctg
atcgagtcgtcgccggagctgcaggcggccgacagcgaggaccgcatcgcgcccaagctg
gagcgcaagaagcgcaccgtgtcgcgcgacgacctggtgcgccaggccgaggcgctgatg
gccgagctggccggctcgcgcgcgctgctcgaggtccagtacgagaacgaggtcggctcc
ggcctcgggcctacgctcgagttctactcgcaggtgtcgcgcgagctgcagcgggcggac
gcggagctgtggcgcggcgagcggtaccggccgccacccgacatcaccgccgacaagctg
gcgccgtcgtcgtcctcgtcggccgccgacgccgccgcctccgacggcgtcgagtacatc
cacgcgccgctcggcctctacccgtcgccggtggcgcgctccggcaagtcgggcaccatc
acccggctcaaggccaagtacaagttcctcggcaagctgatggccaaggcgctgacggac
ttccgtctgctggacctgccgctaagcgtgccgttctacaagtggctactgcgtcaggag
cgctccatgacgctggccgacgtgcaccagctggacgcgtcgctggcggccacgctgtcg
cagctggcggccgtggtgcgccgccgccgccagctggaggcggacccggcgctgggcggc
gagcagcgacgcgccgccgtcgaggcgctgggcgtcgacggctgctcggtggaggagctg
ggcctggacttcacgctgcccggacacccgggcatcgagctgaagcggggcggcagggac
gagccggtcaccatccacaacctggaccagtatctcaagctgctcacccactggctcctc
ttcgagagcgtctaccggcaaatggaggccttccgcgagggcttcgagtctgtgttcccg
ctggagaacctgggcatgttcttcccggaggagatcgactgcctgttctgcggcagccag
gagagcccgtgggacgagcgctcgctgagcgaggccttcaagcccgaccacggctacacg
cacgactcgccagccatcaagcggctggtgcgcgtgctgaccgagttcagccacgagcag
cgccgccagttcctcagcttcgtcactggctcgcctcgcctgcccgtcggagggttccgc
gcgctctccccgccgctcaccatcgtccgcaagatcgtgcagtcaaacgagagtccggac
gactttctgccgtcggtgatgacgtgcgtcaactatctgaagctgcccgactacaccagc
caggaggtgatgggcgaacgcatcgccacggccgtccgcgacggccggctcagcttcatg
ctctcctag
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integrated database retrieval system
