Pollicipes pollicipes (gooseneck barnacle): 119098175
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Entry
119098175 CDS
T08250
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119098175
Spliceosome [BR:
ppoi03041
]
Common components
Common spliceosomal components
General mRNP proteins
119098175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
119098175
NCBI-ProteinID:
XP_037076998
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MTDDLDVHELLEAPYTKKVFRRKVLPKHGRPGRRIQTAAVSETRTPCHLLCRDLCLRRPP
GVKYALFPVVLSGRLDLTPEERDARTVFCMQLSQRVKTRDLEEFFSSVGKVTDVRMIMCN
KTRRFKGIVYVEFKDVESVPLAMGLTGQKLLGVPIMVQPSQAEKNRAAAAAAAAGPATAR
PDARGSMRLYVGSLHFNITEDMLKGIFEPFGKIDDIQLIMDSQTGRSKGYGFLTFNKADD
AKRALEKLNGFELAGRPMKVGHVTERSEVAAGGPNVLDSDEMDRSGVDLGATGRLQLMAK
LAQGTGMQLPAAAASALNHNQMGGIAAQPGIAPPIATQCFMLSNMFDATTAAQNPGFDSD
VRDDVVEECNKHGGLTHVYVDKESPQGNVYVKCPSIASAAASVNSLHGRWFAGKVITAAY
VPLINYHSLFPDAMSAQTLLLPLRAQRPML
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgatttggacgttcacgagctgttggaggcaccctacactaaaaaggttttc
cggagaaaagtgttgccaaaacacggacgccctggtcgtcgtatccagacggcagcagtg
tccgaaaccaggaccccgtgtcacttgctctgtcgtgatctgtgcttgcggcgtccccct
ggtgtcaaatatgctctctttccagtggtcctttcagggcggctggacctgacgcccgag
gagcgcgacgcgcgcaccgtcttctgcatgcagctgtcgcagcgcgtcaagaccagagac
ctggaggagttcttctcgtcggtcgggaaggtgacggacgtgcgcatgatcatgtgcaac
aagacccgccgcttcaagggcatcgtgtacgtggagttcaaggacgtggagtcggtgccg
ctggccatgggtctgaccggccagaagctgctcggcgtgccgatcatggttcagccctct
caggcggagaagaaccgtgcggcggcggccgccgccgccgccggcccggccactgctcgg
ccagacgcccgcggctcgatgcggctgtacgtgggctcgcttcacttcaacatcaccgag
gacatgctgaagggcatcttcgagccattcggcaagatcgacgacatccagctgatcatg
gactcgcagacgggccgctccaagggctacggcttcctcacgttcaacaaggcggacgac
gccaagcgggcgctggagaagctgaacgggttcgagctggccggccggccgatgaaggtg
ggccacgtgaccgagcgctcggaggtggccgccggcgggcccaacgtactcgactcggac
gagatggaccgctcgggcgtcgacctcggcgccaccggccgactccagctgatggcgaag
ctggcgcagggtaccgggatgcagctgccggcggcggcggccagcgcgctcaaccacaat
cagatgggcggcatcgcggcccagccaggcatcgcgccgcccatcgccacgcagtgtttc
atgctctccaacatgttcgacgccaccaccgccgcccagaaccccggcttcgactcggac
gtgcgcgacgacgtggtcgaggagtgcaacaagcacggcggcctcacgcacgtctacgtg
gacaaggagtcgccgcagggcaacgtctacgtcaagtgtccgagcatcgcgtcagccgcc
gcctctgtcaactcgctgcacggacgctggttcgccggcaaggtgatcacggccgcgtac
gtgccgctcatcaactaccacagcctcttcccggacgccatgtcggcccagacgctgctg
ctgccgctgcgggcccagcggccgatgctgtag
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