Pollicipes pollicipes (gooseneck barnacle): 119098338
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Entry
119098338 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoi03009
]
119098338
Enzymes [BR:
ppoi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
119098338
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119098338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
FtsJ
Ig_GpJ_C
FTA4
Motif
Other DBs
NCBI-GeneID:
119098338
NCBI-ProteinID:
XP_037077155
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MKMTDENSSENEDIEAEPQPFTDENDEWLKPKKVSLMDSDDSGESDGAMGDDFGEDASDD
GDSPDEEGSSDDDESEDEAGLLPVERAAKRLLKEEAKEKRLAQAELDSSVXINIAEEDKF
VLPSAEDQEREASLPADLQTLKTRIHDIVHVLSDFASRRQADRSRQEYVQQLRKDLCLYY
SYNEFLMQHLMDLFHVSELLDALEANEIQRPVTIRTNTLKARRRDLAPSLIDRGVNLDPI
GPWSKVGLVVYSSQVPIGATPEYLAGHYMLQGASSMMPVLALAPQDGETVLDMCAAPGGK
TTYIGALMKNTGMIYANDSNSERIKAVVGNLHRMGVTNAVISCVDGRELPKVRSGFDRAL
LDAPCSGTGVVAKDPAVKTCKDEKDIQRCAQLQRQLLLAAIDCVNAKSATGGYVTYSTCS
ILVEENEAVIEYALNKRNVKVVPTGLTVGKEGYVKFKAKRFHPSMSHTRRFYPHTHNMDG
FFVAKLKKFSNTIPGTEPAPEEPAPPAKKRKAEPDSDEGFDDMEESRCVAICQGKAPKED
KTAALAWREKGGFKSGRRRGRSGPGRQVRRCSIRKRKRSSGSLRIVCDELCNAGGVGVAS
FGGLSTAGRCRGGISERAIAVRGSSCWLVNHCSGSWPMQGGLTLVLAECWIEGALRLKSS
CLGHRRTQTCRLCPPVIRMRVMLRTHFDVVVLTSAISSTAKVFFFGAVRWTNKSDPEWIS
LWH
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgacggacgaaaattcttccgaaaatgaagatatagaagcagaaccccagccc
ttcacagatgaaaatgatgagtggctgaagccgaagaaggtatccctaatggactcggat
gactcgggtgagtcagatggtgcgatgggggacgacttcggtgaggacgcctctgatgat
ggcgattcgccggacgaggaagggagcagtgacgacgatgagagtgaggacgaggccggc
ttgctgccggtcgagcgggcggccaagcgtctgctgaaggaggaggcgaaggagaagcgt
ctggcgcaggctgagctggacagctcggttnagatcaacatcgctgaagaggacaagttt
gttttgccatcagctgaggatcaggagcgcgaagcgagcctgccggcagaccttcagact
ctgaagacacgcatccacgacatcgtgcacgtgctcagcgacttcgccagccggcggcag
gcggaccgctcgcgccaggagtacgtccagcagctgcggaaagacctgtgcctctactac
agctacaacgagttcctgatgcagcacctgatggatctgttccacgtgtcggagctgctg
gacgcgctcgaggcgaacgagatccagcggccggtgacaatccgcaccaacacattgaag
gcgcggcgccgcgacctggcgcccagcctgatcgaccgcggcgtcaacctggacccgatc
gggccctggtccaaggtgggcctggtggtgtacagctcgcaggtgccgatcggcgccacg
cccgagtacctggccggacactacatgctgcagggcgcctccagtatgatgcccgtgctg
gcgctggcgccgcaggacggcgagactgtgctcgacatgtgcgcggcgcccggcggcaag
accacctacatcggcgcactcatgaagaacaccggtatgatatacgccaacgactcgaac
tccgagcgcatcaaggccgtggtgggcaacctgcaccggatgggcgtgaccaacgccgtc
atctcgtgcgtggacggtcgcgagctgcccaaggtgcgctcgggcttcgaccgggcgctg
ctggacgcgccctgctcgggcacgggcgtcgtcgccaaggacccggccgtgaagacgtgc
aaggacgagaaggacatccagcggtgcgcgcagctgcagcgccagctgctgctggcggcc
atcgactgcgtcaacgccaagtcggctaccggcggctacgtcacgtactccacctgttcc
atattggttgaggagaacgaggcggtcatcgagtacgcgctcaacaagcgcaacgttaag
gtcgtgcccaccggcctgacggtcggcaaggagggctacgtcaagttcaaggcgaagcgg
tttcacccgagcatgtcgcacacgcgtcgcttctatccgcacacgcacaacatggacggc
ttcttcgtggccaagctgaagaagttctccaacaccattccggggacggagccggcgcca
gaggagcctgcgccgccggccaagaagcgcaaggccgagcctgacagcgacgagggcttc
gacgacatggaagagtcccggtgtgtcgccatctgccagggaaaagccccgaaagaagac
aaaacagcagcactcgcctggcgcgaaaaagggggattcaaaagcggtcgccgaagggga
agaagtggaccgggtcggcaagtccgaaggtgcagcatcagaaaaagaaaaagaagttcg
ggaagtcttaggattgtttgtgacgaactgtgtaatgctggtggggtcggtgttgcatca
ttcgggggtttgtcgacggcgggacgctgtcgaggtggtatctctgaacgcgccatagct
gtgagggggagctcttgttggttggtaaaccactgctcgggctcgtggcctatgcagggt
ggcctgacgctggtgcttgctgaatgctggattgaaggagcccttcggttgaagagctct
tgtttaggtcataggcgcacgcaaacatgtcgtttatgtccacctgtcatacgcatgcgt
gtcatgttacgtactcatttcgatgttgtagtgctgacatcagctatttcctcaacagca
aaagttttttttttcggtgcagtgagatggaccaataaaagtgacccagaatggatcagc
ctttggcactag
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