Pollicipes pollicipes (gooseneck barnacle): 119098401
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Entry
119098401 CDS
T08250
Name
(RefSeq) E3 ubiquitin-protein ligase HERC2-like
KO
K10595
E3 ubiquitin-protein ligase HERC2 [EC:
2.3.2.26
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119098401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppoi04121
]
119098401
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119098401
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119098401
Enzymes [BR:
ppoi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119098401
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
HECT type E3
119098401
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
119098401
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
119098401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
Cul7
MIB_HERC2
RCC1_2
Cyt-b5
UBA_7
SH3_15
UBA
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
119098401
NCBI-ProteinID:
XP_037077215
LinkDB
All DBs
Position
Unknown
AA seq
2664 aa
AA seq
DB search
MSGDMTLRYQRQLDARWQQVDIQEVFTRDGLCRLWNQLLTDGELTGAFSDGLVNAAGAVA
RKGESGHFYCGARSLTCPCCDGICGPGYGCNCEPCQQLDREMGGEQASETTSCLSACRIR
QRVAVVQRCFSALRPQPAAPPADASSSPASSTVVSGRCLGAREPPAHSLARVGSRAAMGF
AIAFLRRAWRSGEDADICSDLLKESLDALRYLPEGNLFDEESVSPVWLEVVDKANRFLRS
VVLGEVGGVPTADRHLALSLLLELAAQRAALSQILSVVLLILQIWHDAGHTAADNRTRRH
GSSAPLLPVLHRLQAAAAAAAGQGSAAAAAAPHELTPAALSPTEVFLRLLELPSDPELHV
DLRQVAVVLLCLLDRMAAPLQPDNTAAKTPAAASLSRVEGLADLRVKQMACGEQAALLLA
HTGAVYLVVYGADKQSLAPVEGLADKEVVHVSAHPEGQHYMAVTAHGELLSWGNGDGGRL
GHGDCQSLEAPALVVALTGKHVTCCSCGSTYSAALTSCGELYTWGRGNYGRLGHGNFEDC
HLPTLVQALTGHRVVDVCCGSGDAHTVAVTDAGLVYTWGDGDYGKLGRGGSEGSRVPQLV
ERLQGARVVRAVSGAQFSAALTDAGVVYTGGKGDTFRLGHGTEEHARFPLKVEALAGKKV
RQLSVGVTTCVAVTEEGLVYCWGRGVAGRPSVLPGPAPLAELAGRTVLGVCCGPLQLFAW
SPGAESKVSRRVPFVVDASEATFVYLERLMERAAPPAAAAARPPTQEDECMMVAALRLLT
LQLHAAITHGLDLSSLGLAAGSRLLTALKSRVVELASGGGVLGSVQAAAQATLKVGWSAL
LPTAEERAKTLSTLLPHAGCEVGSPSAGRLFMTDLLVSSLMADGGLETALRAAVKVEVQD
LEEGGEKEVLLSQMMTEQAQLEAETKRSQSASGQKPPIPLLHLVKQLLRNISSQTLYRLQ
AVSTADSALSQSASELPPPPPPPSTGGSGLQRSASLDLLTRFQRLLLKRERHDRGAGSLL
GKYVQLLMVYVNDTLSVACGVAAAGCKQFALVSATLRDDIVGVLVPELVLCLLMLQQRSP
VLRCPHLSGPLLPLLDTLDRFNRLAPGAEREDTEDLAWPGIIGASHSTHSVRSSDEVPVI
RRADIENHNRDGGLWLLIAGKVYDVQDFKRRQHSAQALDTLRGLFVTVDSSTLSSPLVDA
ERSLALLLGLQAHTLYRSAPPQPAELQAQALLDSGVFDGGLARGVSQGLDDADKDRETTN
SPFKAHMDSSAMEDTVKLILAYAEGIDEDEGVQRLSSAISGHCDKFHLRMPLQVSPDHPV
EQVGRRLLAAVLPAAGPDGEATEPRELPEPLPELLRIVQRTKLSLIRTRQQLDSSYKEVC
AEPMDKCRFLLYKMRPLSCAAARAASGRRLLHRSEKFEEDRSEKVGDEDLSEKLVAEDRS
EKLVDEDRSEKLLDEDRSEKLVDEDRSEKLEEDDPSEKRSGGGVGSHDNRRDEAPEQVVK
DALSCDSEPGAAAAVRVVPGKLALKLEMMETTETWTPAACGPKREHIASGAALPESSPVD
VLEIANKIAAFVTQTSVDVGVVQKALTCQMERAGLRLRGLDMVHGLLAKTHLVASARVHL
LMGWLGLGPTLKASHTPLPSCLDGVRRSRPYERAQLLVQHGRLQQLAAHQLRQLAADAEQ
QFRGRSCKSTRLKENLNHMDQNGLSTLPSARFLLPLLAVLSGEHGPDVGSMLVSSGLLAT
AQTLLRLLGPDPSGGPEEPLSVPAILEETVERQRSPQYQLTGPEMAALMKIGTRVVRGED
WKWGDQDGPPSGEGVVIGELGEDGWIRVQWDNGSANSYRMGKEGRYDLKLADVPQPLSSD
DEDDDDDLTATEAPSESRQPTSLFRQSCLRLLQAHTLAAGLHGEATAPASVHRLTALIRD
IVRHGRTEPASPLQEPEASLHTQHRSWATLPLVRAVAGCSPAVQRALCRPAWLTLLLDRL
EPHVPVEAQLQSVLLLSSCLAACREPDQMRALLHRLLTRMGEAMLTGANEAKLAHGGDGL
VRAGGRHSLTASLTSTLAEEVVALVRRLHALPHWTAVTSQYLADCVAALPAQPAADNEAP
AESPPDDASGDYRQAALLAAVSVVGGVDPRPRLGGLVRVGADNRGLVVRLGVQKLFVRLL
CSGELKRLPVAAVVGLPSVPPTVERFPTSDDFIQMWANLLLFAMEAPRAEQIKSPMQAAA
VSRAGVRQQQQQVAALAACRQLTGRQQLLRRVLQSRQLLQRLTAVATQPSPVKTGYSPLE
IEVAALALSQQLAYDLHHARPELGAADTPSLGASPPPSEVVRQLIEMGFVRRTVERAQQC
MDGAPSAESVVAWILEHLPTSGSSSDSEESSLSSDDEREEEEDDDEDTSTSDSAAAGATG
YQAPVQPGPAEAFRRRHQFASNDDYALYVRTHIAVGLTVRCCRSYEEVHEGDVGTVVKLD
RDGLHDLNVQVNWQRKVGTYWVRYIHVELLGVAAVAAATTHVRVGDRVRVRPAVHTPKYK
WGSVTHRSIGIVTGISSNGRDVTIDFPQQGNWTGLLTEIEPVPTSHPGVSCAVCAAAPIA
AAPYGKLAAVTVAPHETWVTLLYDLAEYHQYIEITVRECREGGHRLSRHALVHGRQRTDD
ETGAHRCPGQRRPRRSLRLGPIVS
NT seq
7995 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgacatgacgctgcgctaccagcgccagctggacgcccgctggcagcaggtg
gacatccaggaggtgttcacgcgcgacggcctctgccggctctggaaccagctgctgacc
gacggcgagctgacgggcgcctttagcgacggccttgtcaacgccgccggcgccgtcgcc
aggaaaggcgaaagcggtcacttctactgcggcgcgcgctcgctgacatgtccatgctgc
gacggcatctgcggccctggctatggctgcaactgtgaaccgtgccagcagctggaccgc
gagatgggcggcgagcaggccagcgagaccaccagctgcctctcggcctgccggatccgg
cagcgcgtggccgtggtgcagcgctgcttcagcgccctacgaccgcagccggccgccccg
ccggccgacgcctcctcctcgccggcctccagcacggtggtctcgggccgctgtttggga
gcccgggagccgccagcccacagtctggcccgggtcggctcccgcgccgccatgggtttc
gccatcgccttcctccggcgggcctggaggtcaggagaggatgccgacatttgctccgat
ctacttaaggagtctctggacgcgttgcggtacctgcctgagggcaatctgttcgacgag
gagtcggtgtcgcccgtctggctggaggtggtcgacaaggccaatcgcttcctgcgctcc
gtcgtgctcggtgaggtgggcggcgtgcccacggcggaccggcacctggcgctgtcgctg
ttgctggagctggccgcccaacgagctgcgctcagccagatactcagcgtggtgctgctc
atcctgcagatctggcacgacgccggacacacggccgccgacaacaggacgcgtcggcac
ggtagcagcgcgcccctgctgcccgtgctgcaccgactgcaggcagcggcggccgccgcg
gccggccagggttcagccgccgccgccgccgcccctcacgagctgacgccggccgccctg
tctccgaccgaggtgttcctgcgcctgctggagctgccgtccgacccagagctgcacgtg
gacctgcgccaggtggccgtggtgctgctgtgcctgctggaccggatggcggcgccgctg
cagcccgacaacaccgccgccaagacgccggccgccgccagcctcagccgcgtggaggga
ctggccgacctccgagtcaagcagatggcctgcggcgagcaggcggctctgctgctggca
cacacgggcgccgtctacctggtggtgtacggcgccgacaaacagtcgctggcgccggtg
gagggcctagctgacaaggaggtggtccacgtgtcggcccacccggaggggcagcactac
atggcggtcaccgcgcacggcgagctgctgtcctggggtaacggcgacggcggccggctg
ggccacggcgactgccagtccctggaggcgcccgccctggtggtggcgctcaccggcaaa
cacgtgacctgctgcagctgcggcagcacttacagcgctgctctgaccagctgcggcgag
ctgtacacctggggccgcggcaactacggccgactgggtcatggcaactttgaggactgc
cacctgcccactctggtgcaggctctcaccggtcaccgcgtggtggacgtctgctgtggc
tcgggcgacgcgcacacggtggccgtcacggacgctggcctcgtctacacctggggcgac
ggcgactacggcaagctgggccgcggcggcagcgaaggctcgcgcgtgccgcagctggtg
gagcggctgcagggggcacgcgtagtgcgcgccgtcagcggcgcccagttctcggcggcg
ctcaccgacgccggcgtcgtctacaccgggggcaagggcgacacgttccgactgggccac
ggcaccgaggagcacgccaggttcccgctcaaggttgaggcgctcgcagggaagaaggtg
cgccagctgtcggtgggcgtgacgacgtgtgtggcggtgacggaggagggcctggtgtac
tgctggggccgcggcgtggccggccggccgtcggtcctgcccggcccagcgccactggca
gagctggccggccgcaccgttctgggcgtctgctgcggcccgctacagctgttcgcctgg
tcgccgggcgcggagagcaaggtgagccgccgcgtgccgttcgtggtggacgccagcgag
gcgacgttcgtctatctggagcggctgatggagagggctgcgccaccggccgccgccgcc
gcccggccgcccacccaggaggacgagtgcatgatggtggctgcgctccggctgctcacg
ctgcagctgcacgcggccatcacgcacggcctggacctgtcgtcactggggctggcggcc
ggcagccggctgctgactgcgctcaagagccgcgtggtggagctggctagcggcggcggc
gtgctcggctcggtgcaggcagccgcccaggccacgctcaaggtcgggtggagcgcgctg
ctgcccaccgccgaggagcgcgccaagacgctctctaccctgctgccacacgccggctgt
gaggtgggatcgcccagcgctggccggctcttcatgaccgacctgctcgtctcgtcgctg
atggccgacggcgggctggagacggccctgcgcgccgccgtcaaagtggaggtgcaggac
ctggaggagggcggcgagaaggaggtgctgctgtcgcagatgatgaccgagcaggcccag
ctggaggccgagaccaagcggtcgcagagtgccagcggccagaagccgcccatcccgctg
ctgcatctggtcaaacagctgctcaggaacatctcgtcgcagacgctgtaccggctgcag
gcggtgtcgacggccgactcggctctgtcacagtctgcgtcggagctgccgccgccgccg
ccgccgccctccaccggcggcagcggcctccagcgctcggcctcgctcgacctgctgacg
cgcttccagcggctgctgctgaagcgcgagcggcacgaccgcggcgccggctcgctgctc
ggcaagtacgtccagctgctgatggtgtacgtcaacgacacgctgtcggtggcgtgcggc
gtggccgccgccggctgcaagcagttcgccctggtttcggccacgctcagggacgacatt
gtcggcgtgctggtgccggagctggtgctgtgtctgctgatgctgcagcagcgcagcccg
gtgctgcgctgcccgcacctgtccgggccactgctgccgctgctcgacacgctcgaccgc
ttcaatcggctggcgcccggcgccgagcgcgaggacaccgaggacctcgcctggcccggc
atcatcggcgcctcgcactcgacccactcggtgcgctccagcgacgaagtgcccgtgatc
aggcgcgccgacatagagaaccacaaccgcgacggcggcctctggctcctcatcgccggc
aaggtgtacgacgtgcaggacttcaagcggcgccagcactcggcccaggcgctggacacg
ctgcggggcctgttcgtgacggtggactcgagcacgctctcatcgccgctggtggacgcc
gagcggtcgctggcgctgctgctgggtctgcaggcgcacacgttgtaccgcagcgcgccg
ccgcagccggccgagctgcaggcgcaggcgctgcttgacagcggcgtgttcgacggcgga
ctggcgcgaggcgtctctcagggactggacgacgccgacaaggaccgtgagaccaccaat
tcccccttcaaggctcacatggactcatccgccatggaggatactgtcaaactgattcta
gcgtatgcggagggcattgatgaggacgagggcgtgcagcggctgagcagtgccatctct
gggcactgcgacaagttccacctgcggatgccgctacaggtgtcgcccgaccacccggtg
gagcaggtgggccgccggctgctggcagccgtgctgccggcggcggggccggacggcgag
gcgaccgagccgcgagagctgccggagccgctgccggagctgctgcggatcgtgcagcgg
accaagctctcgctgatccgcacgcgacagcagctcgactccagctacaaggaggtctgc
gccgagcccatggacaagtgccggttcctgctgtacaagatgcggccgctgtcgtgcgcg
gcggcgcgcgccgcctctggccgtcgcctactgcaccgctccgaaaagttcgaggaagac
cgctccgagaaggtgggcgatgaggatctctcggagaagctggtggcggaggaccggtca
gagaagctggtagacgaggatcgctctgagaagctgctcgacgaagatcgctccgagaag
ctggtggacgaagaccgttcggagaagctagaagaggacgacccgtccgagaagcgctcc
ggcggcggggtggggagtcacgacaaccgaagagacgaggcccccgaacaggtggtgaag
gacgcactgtcgtgcgactcggagcctggggcagccgctgccgtccgcgtcgtgcccggc
aagctggcgctcaagctggagatgatggagacgacagagacttggacgcccgcagcgtgc
gggcccaagcgcgagcacatcgcctcgggcgcagcgctgccagagtcgtcgcctgtcgat
gtgctcgagattgctaacaagatcgccgcgttcgtgacccagacctcggtggacgtcggc
gtggtgcagaaagctctcacatgccagatggagcgggccggcctgcgcctgcgcggtctg
gacatggtgcacggcctgctggccaagacgcacctggtggcgtcagcgcgcgtccacctg
ctgatgggctggctcggcctgggacccacgctcaaggccagccacacgccgctgccgtcg
tgtctggacggcgtgcgtcgtagccggccgtacgagcgggcacagctgctggtgcagcac
ggccggctgcagcagctggccgctcatcagctgcgccagctggcggccgacgccgagcag
cagttccgcggccgtagctgcaagtccactcggctcaaggagaacctcaaccacatggac
cagaacggcctctcgacgctgccgtcggccaggttcctgctgccgctgctggctgtcctg
agcggggagcatggcccggacgtgggctcgatgctggtcagctccggcctgctggccacg
gcgcagaccctgctccggctgctcggtccggacccgtccggtgggccggaggagccgctc
tcggtgccggccattctggaggagacggtcgagcggcagcgctcgccgcagtaccagctc
accgggcccgagatggccgcgctcatgaagataggcacgcgcgtcgtgcgcggcgaggac
tggaagtggggtgaccaggacgggccgccgtccggcgagggcgtcgtcatcggagagctg
ggcgaggacggctggatccgcgtccagtgggacaacggctcggccaactcctaccgcatg
ggcaaggagggccgctacgacctcaagctggccgacgtgccgcagccgctctcctccgac
gacgaggacgacgacgacgacctcacggccacagaggcgccatccgagagccgacagccg
accagcctgttccgccagagctgcctgcggttgctgcaggcccacacgctggcggccggc
ctgcacggcgaggcgacggcgcccgccagcgtgcatcggctcacggcgctcatcagggac
attgtcaggcacggccgcacggagccggcctcgcctctgcaggagccggaagcgtcgctg
cacacgcagcaccgcagctgggccacgctgccgctggtgcgggccgtggcgggctgctcg
ccggccgtacagcgcgccctctgccggcccgcctggctcaccctgctgctcgacaggctc
gagccgcacgtgccggtggaggcccagctgcagagcgtgctgctgctgtcctcatgcctg
gccgcctgccgcgagccggaccagatgcgcgccctgctgcaccgcctgctgacgcgcatg
ggggaggccatgctgactggtgccaacgaggccaagctggcgcacggcggggacggcctg
gtgcgcgccggcggacgccattccctgaccgcgtcgctgacctcgacgctggccgaggag
gtggtggcgctggtgcgtcggcttcacgcgctgccccactggacggccgtcaccagccag
tacctggccgactgcgtggcggcgctgcccgcccagccggccgctgataatgaggcgcca
gccgagtcgcctccggacgacgcctctggagactaccgccaggcggcgctgctggcggcc
gtctccgtcgtcggcggcgtcgacccgcggccgcggctgggcggcctggtccgtgtcgga
gccgacaaccgtggcctggtggtgcggctgggcgtgcagaagctgttcgtgcgcctgctg
tgctcgggcgagctgaagcggctgccggtggcggccgtcgtcggccttccgtccgtgccg
cccaccgtcgagaggttcccgacgtcggatgactttatccagatgtgggccaacctgctg
ctgttcgccatggaggccccacgggcggagcagatcaagtcgccgatgcaggcagcggcc
gtcagccgcgccggcgtgcgccagcaacagcagcaggtggcggcgctggccgcctgccgc
cagctgacggggcggcagcagctgctgcgccgcgtcctgcagagccggcagctgctgcag
cggctcacggccgtcgccactcagcccagtccggtcaaaaccgggtacagcccgctcgag
atcgaggtggcagctctggcgctatcgcagcagctggcgtacgacctgcaccacgcgcgc
ccggagctgggcgcggccgacacgccgtcgctgggtgcgtcaccgccgcccagcgaggtg
gtgcgccagctgattgagatgggcttcgtgcgccgcacggtggagcgcgcccagcagtgc
atggacggcgccccgagcgcggagtcggtggtggcctggatcctggagcacctgcccacc
agcggctccagctccgactccgaggaaagctccctctcctccgacgacgagcgcgaggag
gaggaggacgacgacgaggacacgagcacctccgactcggcggccgccggcgccaccggc
taccaggcgcccgtgcagccgggcccggccgaggcgttccgccggcgccaccagttcgcc
tcgaacgacgactacgccctgtacgtgcgcacgcacatcgccgtggggctgacggtgcgc
tgctgccgctcctacgaggaggtgcacgagggcgacgtcggcaccgtggtcaagctggac
cgcgacggcctgcacgacctcaacgtccaggtcaactggcagcgcaaggtgggcacctac
tgggtgcgctacatccacgtggaactgttgggcgtggcggccgtggcggcggccaccacg
cacgtgcgcgtcggtgatcgtgtgcgcgtgcgaccggccgtccacacgcccaagtacaag
tggggctcggtcacccaccgcagcatcggcatcgtcacaggcatcagcagcaacggccgg
gacgtgaccatcgacttcccgcagcagggcaactggacgggcctgctgaccgagatcgag
cccgtgcccaccagccacccgggcgtcagctgcgccgtctgcgccgccgcccccatagct
gcggcaccctacggcaagctggccgccgtcaccgttgcgccgcacgagacctgggtcacg
ctgctttacgacctggccgagtaccaccagtacatcgagatcacagtgcgcgagtgtcgc
gagggcgggcatcgactgtcgcggcacgccctggtgcacggccgacagcggaccgacgac
gagacgggcgcgcaccgttgtcctggccagcgacggccgaggaggtcgctccgactgggg
cccatcgtctcgtag
DBGET
integrated database retrieval system
