Pollicipes pollicipes (gooseneck barnacle): 119098413
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Entry
119098413 CDS
T08250
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119098413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119098413
03041 Spliceosome [BR:
ppoi03041
]
119098413
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119098413
Spliceosome [BR:
ppoi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119098413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
119098413
NCBI-ProteinID:
XP_037077223
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MRHRRSSAGLVFLALVKTPDDMTNRPRIAELRALAGLHVLSLKKVNRLEKVRLKAAREST
HAAKQRVDAFHLTLQNLLYEIVHVKREINRCLEFRSQDEDITLVSEEEFYRQAPETISQL
AVTRDDAHRRHLARLDWELEQRRGLAADCRQLDGDKKRISQRIGEQRRRLADLAPQLATI
LEVRRSQRWPTARGPLQQELALPLDRRRQQHRLAALLPRPLYLLYVQVAAYGEACDAAVS
ATICGNEEEACSLKQADQRDAVDESDSDQEAEEEVRHKKRHRKTGREEEEQRRRRLLHKH
PLLVVVEIVCEDLGRLVLEFVHLTQLDIVTVSVAIKDCPVSGPLLSAETLLDHLEPGDSG
TDAPGAATAHQLRRACLAPLRQYVAAGQVGRPYLWAQRLAGLEFASDGSEQGAPVASEAV
SALHVESAVRRVRARLRARVALQSQLAAIASGELPLSEQLRASFPARRDSRLVSWQPVSV
ETYRASGVLSADLLDDSCSCFLARIAHGNEAQLCCYVALSPQHPRVPPVVGLLLTGRDRP
QTARQPSLRVLEHELNVALPARLGAAGRPALLPALLAAACSGLDVLREADDAAPPAPQRL
MLRQHRGRDRVPPFRYDPALRLFTH
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacagaaggtcatctgccggcctcgtgttcctggcgctggtcaagacgccggac
gacatgaccaaccggcctcggatcgccgagctgcgtgcgctggctggcctgcacgtgctc
tcgctgaagaaggtcaaccggctggagaaggtgcggctgaaggcggcgcgcgagagcaca
cacgcggccaagcagcgcgtcgatgccttccacctgacgctgcagaacctgctgtacgag
atcgtgcacgtcaagcgtgagatcaaccgctgcctcgagttcaggtcgcaggacgaggac
atcactctggtgtcggaggaggagttctaccggcaggcgcccgagaccatcagccagctg
gcggtgacccgcgacgacgcgcacaggcgccacctggcacggctggactgggagctggag
cagaggcgcggcctggccgccgactgccgccagctggacggcgacaagaagcgcatcagc
cagcgcatcggcgaacagcgccgccggctggccgacctggcgccccagctggccaccata
ctcgaggtacgccgctcccagcgctggccgacagcacgcgggccgctgcaacaggagctg
gcgctaccgctggaccgacgccgccagcagcaccgcctggccgccctcctgccgcggccg
ctctacctgctctacgtccaggtggccgcgtacggcgaggcttgcgatgcggctgtgagc
gccacgatatgtggcaacgaggaggaggcgtgctcgctgaagcaggccgaccagagggac
gcggtggatgagtcggactctgaccaggaggctgaggaggaggtgcgccacaaaaaacgt
catcgcaagacgggccgcgaggaggaggagcagcgccgccggaggctgctgcacaaacac
ccgctgctggtggtggtcgaaatcgtctgtgaagacctgggacgacttgtgctggagttc
gtccatctgacccagctggacatcgtcaccgtctcggtcgccattaaggactgccctgtg
agcgggccgctgctctctgccgagacgctgctggaccacctggagccgggcgacagcggc
accgacgcgccgggcgccgccaccgcccaccagctgcggcgcgcctgcctggcgccgctg
cgccagtacgtggccgctggacaggtgggccggccctacctctgggctcagcgcctggcc
ggcctcgagttcgcctcggacggcagcgaacagggcgcgccggtggccagcgaggcggtc
agcgcgctgcacgtggagtctgccgtgcgccgggtccgcgcccgactgcgagcgcgcgtc
gctctccagagccagctggccgccatagcgtccggcgagctgccgctgtcggagcagctg
cgggccagcttcccggcgcgccgcgactcccggctggtctcgtggcagcccgtcagcgtc
gagacgtaccgcgcctcgggcgtgctcagcgccgacctgctggacgacagctgcagctgc
tttttggcgcgcatcgcccacgggaacgaggcgcagctgtgctgttacgtggcgctgagc
cctcagcacccgcgggtgccgcctgtggtcgggctgctgctcaccgggcgggaccggccg
cagacggcccgccagccctcactgcgggtgctggagcacgagctgaacgtggcgctgccg
gcgcggctgggcgcggccggccggccggcgctgctgccggcgctgctggcggccgcctgt
tcgggcctcgacgttctgcgcgaggcggacgacgccgctccgccggcgccgcaacgactg
atgctgcgtcagcaccggggtcgcgaccgcgtgccgccgttccggtacgacccagccctg
cgcctgttcacgcattga
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