Pollicipes pollicipes (gooseneck barnacle): 119098967
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Entry
119098967 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119098967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119098967
03016 Transfer RNA biogenesis [BR:
ppoi03016
]
119098967
Enzymes [BR:
ppoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
119098967
Messenger RNA biogenesis [BR:
ppoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
119098967
Transfer RNA biogenesis [BR:
ppoi03016
]
Prokaryotic type
tRNA degradation factors
119098967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
119098967
NCBI-ProteinID:
XP_037077913
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
SSRLAVSELARFADGSATAQDGDTAVLVTAVSRPRPGPPPGFLPLTVDYRQKAAAAGRIP
TNFLRRELGPSEQEILTSRLIDRSLRAQFPAGYGADTQVTCNLLAVDGDRLPDVLCVNAA
SAALACSDIPWGGPVGAVRMGWLDGQPLVNPGRRELAESSLNLMVTAARRIQVVMLEAAA
DNILQQDFMHAIKVGVREAQHVVRGVEQLQRKHGRTKRHFQPPPVDAELDDSVAALCETR
LEAILTDCRHDKISRDEAVSAVRADVLEKLRADGGGERAAQASDAFNRLFRALFRRLALD
RETRCDGREADELRPISCRVNLHRPLHGSALFQRGQTQVMCTLTLDSAESVLKSDLMSVI
TQGVRPKNFMLHYEFPPYATNETGRPGGLGRRELGHGALAERALRAVVPEPFPFALRLTA
EVLESNGSSSMASVCAGSLALMDAGVPVSAPVAGVAIGMVSRPDPECPERLGQYRLLTDI
LGIEDYCGDMDFKLACTPTAITALQADFKLPGLPLSVIMEAVTAGRTATREILGIMAKSL
AQPRAERKDNWPVTEEMTVPAHKRGRLLGVGGVNLKRLLADTGVQVTPRDDTTFCVFAPS
PAALAEARAQLDALLESSPEPEFEFGAVYTARVVELRETGALVRLHPNATPALVHNSQLD
ARPVRHPSALGLSVGDEIQVKYFGRDPVSGHVRLSRKVLLAPAGGPVRNLQPRSDAEQG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
agcagccggctcgccgtcagcgagctggcgcggttcgccgacggcagcgccacggcgcag
gacggcgacacggccgtgctggtgacggccgtcagccggccgcgacccgggccgccgccc
ggcttcctgccgctgaccgtcgactaccggcagaaggcggccgccgccggccgcatcccc
accaacttcctgcgccgggagctcggccccagcgagcaggagatcctcaccagccggctg
atcgaccgctcgctgcgcgcgcagttcccggccggctacggcgccgacacgcaagtcacg
tgcaacctgctggccgtggacggcgaccggctgccggacgtgttgtgtgtgaacgcggcg
tcggcggcgctcgcctgctcagacatcccctggggcggcccggtgggcgccgtgcgcatg
ggctggctcgacggacagccgctggtgaacccgggccgccgcgagctggcggagagctcg
cttaacctgatggtcacggctgcccgcagaatacaggttgtcatgctggaggcggccgcc
gacaacatactgcagcaggacttcatgcacgctatcaaggtgggcgtgcgcgaggcacag
cacgtggtgcgcggcgtggagcagctgcagcgcaagcatggccgcaccaaacgccacttc
cagccgccgccggtcgacgccgaactcgatgactcggtggcggcgctctgcgagacgcgc
ctcgaggccatcctcaccgactgtcgacacgacaagatctctcgcgacgaggccgtgtcg
gccgtgcgcgccgacgtgctggagaagctgcgcgcagacggcggcggcgagcgcgccgcg
caggcgtccgacgccttcaaccggctgttccgcgcgttgttccgtcgcctggcgctggac
cgcgagacgcgctgtgacggccgggaggcggacgagctgcgcccgatctcgtgccgcgtc
aacctgcaccggccgctgcacggctcggcgctcttccaacgcggccaaacgcaggtcatg
tgcacgctgacgctggactcggccgagtccgtgcttaagtccgacctcatgtcggtgatc
acgcagggcgtgcggcccaagaacttcatgctgcactacgagttcccgccgtacgccacc
aacgagacgggccggccgggcggcctgggccggcgcgagctcggccacggcgctctggcc
gagcgcgcgctgcgcgccgtcgtgcccgagccattcccgtttgccttgcgcctgacggcc
gaggtgctcgagtcgaacggcagctcgtcgatggcgtccgtatgtgccggcagcctggcg
ctgatggacgccggcgtgccggtcagcgcgcccgtggccggcgtggcgatcggaatggtg
agccggcccgacccggagtgtcccgagcggctcggccagtaccgcctgctcaccgacatc
ctgggcatcgaggactactgcggcgacatggacttcaagctggcctgcacgccgaccgcc
atcacggcgctgcaggccgacttcaagctgccgggcctgccgctgtcggtgatcatggag
gcggtgacggccggccgcacggccacgcgcgagatcctcggcatcatggcgaagtcgctg
gcgcagccgcgcgccgagcgcaaggacaactggcctgtcaccgaggagatgaccgtgccg
gcgcacaagcgcgggcgactcctcggcgtcggcggcgtcaacctcaagcgtctgctggcc
gatacgggcgtgcaggtgactccgcgcgacgacaccacgttctgcgtgttcgcgcccagc
ccggcggcgttggccgaggcgcgcgcgcagctggacgcgctgctcgagtcgtcccccgag
ccggagtttgagttcggcgccgtgtacacggcgcgcgtggtcgagctgcgcgagacgggt
gcgctcgtgcggctgcacccgaacgccacgcccgcgctcgtgcacaacagtcagctagac
gcgcggccggtgcgccacccgagcgcgctcgggctcagcgtcggtgatgagatccaggtc
aagtacttcggccgtgacccggtcagcggtcacgtacggctctcgcggaaggtactgctg
gcgccggctggcgggcccgtgcggaacctgcagccccgctctgacgccgagcagggctga
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