KEGG   Pollicipes pollicipes (gooseneck barnacle): 119100114
Entry
119100114         CDS       T08250                                 
Name
(RefSeq) LOW QUALITY PROTEIN: roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppoi03000]
    119100114
   04121 Ubiquitin system [BR:ppoi04121]
    119100114
Transcription factors [BR:ppoi03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    119100114
Ubiquitin system [BR:ppoi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119100114
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf_CCCH_4 zf-C3HC4 Prok-RING_4 zf-C3HC4_2 Vesi_VP2 Citrate_synt RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 119100114
NCBI-ProteinID: XP_037079121
LinkDB
Position
Unknown
AA seq 1061 aa
MPIQGPQWTEFLTCPICLWGFNRERGPVSLSCGHTICKACLQELHRKRCPFDQSVIGLDL
DQLPLNWALLQLSVIGAGPWTSLPTGWALLQLVTGSLTCFSPGGGSGGGAGGPSVLSRSM
QRKLVTIVTCQLLEPEGRSRVLRACRSLGERTVTELILHHQNPAQLSANLWAAVRARGCQ
FLGPAMQEEVLRLVLLALEEGYALSRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRAS
CFKVTKREGDSSLMQLKEEFRTYEALRREHDAQIVQIALEAGLRIAPDQWSSLLYGDVAH
KSHMQSIMDKLQSPSSFNQSIQELIISLQKTGDPAGLSQTRLRLQTLAAVDPAPDSLDTD
WEQVVTALEAAVEVVRVLISFVHNHGGRRVHVDTTHAHNAKYKTNLCRDLKQRGTCPRGP
ACTFAHSEEELERYRAKSRRPKKAADRAESPPPPPPSLPPHGAGLPLRPQKVAPAYRLPA
DGRLRTGAAGASTATEKNACVMGLVPPPAVPVPVVHAVARLPYQLEYFTPVCSPGPAGVL
HQQLVPAVQAAAPPPPQPPPPPPPPPMAGPLYGGRHGMPLQSPPRPGQAITSLSSSGLHS
AGGSIASTAASAAGVAVNVNSSSIASKSLTALRQRKQEILHQLENINGGADGEEADSPPT
PPPPLPPPPEAYPVPAAAAVATGPSAAAEGVAPKHYSIWTSSDNFFYALKSSLAGYQNTK
SRGTDTGPVYSNVRVSSNEDEYIPFSSSSEGASFGPISRTERSGTTPSRPVQVSALSGET
LPTETASQPRPMPGHVIPQNFMQICDPYLYSGGVQYQLVQADGCGMHYNTIGHGVLDPPG
LQMLRLKPCGDRPSDPLPMARNQEGSRLAAENRRFQNELDSLERKFQTGVKVLSPTRPEE
TEAEADESRSLASQEAHLQKDLIRELWFIEHGIEEKQKENKLNVRTSYAVSAAVAASPAP
VAFQQFSNQQSSPTQPYSGQGRHFEPALPGPGQQFVPVVPESEQQLRSSVLKSGQQFGSF
VLESERQFVSSVLESAGHVKPVLQEYWQQLVTSIFESGQQL
NT seq 3186 nt   +upstreamnt  +downstreamnt
atgccgatccagggtccacagtggaccgagttcctcacctgccccatctgcttgtggggc
tttaaccgcgagcgcggccccgtcagcctcagctgcggccacaccatctgcaaggcatgc
ctacaggagctgcacaggaagcgctgcccattcgaccagtcggtgatcgggctggacctg
gaccagctgccgctcaactgggcgctgctgcagctgtcggtgatcggtgctggaccctgg
accagcttgcccacaggctgggcgctgctgcagctggtgacgggcagcctgacttgtttc
agtccgggtggcgggtcgggcggcggcgcgggcggccccagcgtactgtcgcgctccatg
cagcgtaagctggtgacgatcgtcacgtgccagctgctggagccggaggggcgcagccgc
gtactgcgcgcgtgccgctcgctcggagagcgcaccgtcaccgagctgatcctgcaccac
cagaacccggcgcagctgtcggccaatctgtgggcagccgtgcgcgcgcgcggctgccag
ttcctcgggcctgccatgcaggaggaggtactgcgcctggtgctgctggcgctggaggag
gggtacgccctctcgcgcaaggtgctcgtcatgttcgttgtacagcggctggagccgcac
tttccgcaggcgtccaaaaccagcatcggccacgttgttcagctgctgtacagggcctcc
tgctttaaggtgacgaagcgcgagggcgactcgtcgctgatgcagctcaaggaggagttc
cgcacctacgaggcgctgcggcgcgagcacgacgcccagatcgtgcagatcgcgctggag
gccggcctgcgcatcgcgcccgaccagtggtccagcctgctgtacggcgacgtggcgcac
aagtcgcacatgcagagcatcatggacaagctgcagtcgccgtccagcttcaaccagtcg
atacaggagctaataatatcgctacagaagacgggcgacccggccgggctgtcccagacg
cggctgcggctgcagacactggccgccgtcgatccggcgccggactcgctcgacacggac
tgggagcaggtggtgacggcgctggaggcggccgtcgaagtggtgcgtgtgctcatcagc
ttcgtgcacaaccacggcggccggcgtgtgcacgtggacacgacgcacgcgcataatgcc
aagtacaaaacgaatctgtgccgcgacctgaagcagcgcggcacgtgtccgcgcggcccc
gcctgcaccttcgcccactccgaggaggagctggaacggtaccgcgccaagagccgccgg
cccaagaaggcggcggaccgggccgagtcgccgccgccaccgccaccgtcgcttcctccg
cacggcgccggcctgccgctgcgaccgcaaaaggtggcgccagcctaccggctaccagcc
gatggccggcttcgcaccggtgcagccggtgcctccacagctacagaaaaaaacgcatgc
gtgatgggcctagtgccgccaccggccgtcccagtgccggtggtgcatgcggtggcgcgg
ctgccctaccagctggagtacttcacgcccgtctgcagcccgggcccggcgggcgtgctg
caccagcagctggtaccggccgtgcaggcggcggcgcccccgccacctcaaccgccacct
ccgccgccgccgccgccgatggctggcccactgtacggcgggcggcacggtatgccgctg
cagtcgccgccgcgacctggccaggccatcacgtcgctcagctcgtccggtctccactcg
gccggcggcagcatcgcctccacggcagccagcgccgccggcgttgccgtcaacgtcaac
tcgtcgtcgatcgcctccaagtctctgacggcgctgcgccagcgcaagcaggagattctg
caccagctggagaacatcaacggcggtgcggacggcgaggaggccgactcgccgcccacg
ccgccgccgccgctgccgcctcctcccgaggcgtacccggtgcccgccgccgccgctgtc
gccaccggcccctccgccgccgccgaaggcgtcgcgcccaagcactactccatctggacg
tcgagtgacaactttttctacgcgctgaagtcatctcttgccggctaccagaacacaaag
tcccgaggcacggacacggggcccgtctacagcaacgtgcgggtgtccagcaacgaggac
gagtacatcccgttctcgtcgagctcggagggcgcgtcgttcgggccgatctcgcgcacg
gagcggtcgggcaccacgcccagccggccggtgcaggtgtcggcgctgtcgggtgagacg
ctgcccaccgagacggccagccagccgcgccccatgccgggccacgtcatcccgcagaac
ttcatgcagatctgcgacccgtacctctacagcggcggcgtgcagtaccagctggtgcag
gcggacggctgcggcatgcactacaacacgatcgggcacggcgtgctggacccgcccggt
ctgcagatgctgcggctgaagccatgcggcgaccggcccagcgacccgctgcccatggcg
cgcaaccaggagggcagccggctggcggccgagaaccggcgcttccagaacgagctcgac
tcgctcgagcgcaagttccagacgggcgtcaaggtactgtcgcccacgcggcccgaggag
accgaggccgaggcggacgagtcgcgctcgctcgccagccaggaggcgcacctgcagaag
gacctgatccgagagctctggttcatcgagcacggcatcgaggagaagcagaaggagaac
aagctgaacgtgcggacgtcgtacgccgtcagcgcggcggtggcggcgtctccggccccg
gtcgccttccagcagttctcgaatcagcagagcagcccgacgcagccgtactcgggccaa
ggacgacacttcgagccagccttacccggtccgggacagcagttcgttccagtcgtaccc
gagtcagagcaacagcttcggtcatccgtactcaaatcagggcaacagtttgggtcattc
gtactcgaatcagagcgacagtttgtgtcatccgtactcgagtcagcgggacacgtcaag
ccagtcttacaggaatattggcaacagctcgtcacaagcatattcgagtcaggacaacag
ctttaa

DBGET integrated database retrieval system