Pollicipes pollicipes (gooseneck barnacle): 119100194
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Entry
119100194 CDS
T08250
Name
(RefSeq) SR-related and CTD-associated factor 8-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119100194
03041 Spliceosome [BR:
ppoi03041
]
119100194
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119100194
Spliceosome [BR:
ppoi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
119100194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
119100194
NCBI-ProteinID:
XP_037079200
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MDLVKVFNAELTSLYDQKPPISKVKMTSLTKGAIRAIKFYKHAVQSVEKFLQKCRTEYKI
PGLYVIDSIVRQSRHQFGVDRDVFAPRFAKNLSVTFYHIFKCPPEDKSKVIRVLNLWQKN
QVFPPEVIQPIFDLADPESATSREIEQQLLAKEQQPTPAAPPSTAAGAAAGPPGDGPAPA
GRQAEGAPATAQVDPGLIQKLHQLQTLLAQPTATPEQAAPKFNQRLLDDFDYDEEPDGTP
KPVEPSLESLGTLLSNPDVLKQLQGLQQTLQAQKQQEQSERDRKFRLQENEFDKQLAQTV
GSLPFASEIELKPPSASELAMMSAMSAPLAATGDRDMRLELAPELAVPPPRRPASPLEEG
ERGPDTDNDDRARDRDERERESERERERERKKRGLPALKPDHLGVCSTTLWVGHLSKLVH
QEDLSDLFGEYGDVLSIDLIPPRGCAFICMNRRQDAARALLKLKNHKLQGKPITIAWAPG
KGMKGKDFKDYWEVEAGCSYIPHGRLTVMSDLDAMEEGGMIDDQSVPDWLKGRYQQLHQM
DQLPVSAVPVLGDPMQQLAMPAPAGAGTAPFVTLPTSLPPQQQLMAPSEPAGQAMQPMMA
SVPPPVSVALNLAFGGARPPGLMSLPPMGLPPPALLPTASSVLGQPLLSAPPGAAQPLQP
GQLMTSQAGMADQTAAAESADDVTGGTGAAAKPADDITAWHGRAGTTAESTDDVTARHDG
TRVSAESADDVTARDASAGSSAEPADDVTAGDVSTGSSAKSADDVTARDDHAGFAAKSAN
GFTADDFFRRCSLLAVGAAAADHVDAVGASASHHVGAVGPAAAGPGLAAGGAAGRRPAAG
RAAGAAAVGLHHRRADGYRLGRGAAGQRPAGAGRARHRPTGGNAAATEGQSVGRRSGERR
RQQGRRQEGRCGGAAPLPDGAPHQLGQHQRQRAATARARPGARARARQGPRARPR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggatctggtgaaagtgtttaatgctgagctgacgtcgctctacgaccagaagccacca
atatcaaaggtgaagatgacttcactcaccaagggagcaatacgagccatcaagttctac
aagcatgcagttcaaagtgtcgagaagtttctgcaaaagtgtcggacagagtacaaaatc
ccggggctgtacgtgatcgactcgatagtgcgccagtcgcggcaccagttcggcgtcgac
cgggacgtgttcgcgcccaggttcgccaagaacctctccgtcaccttttaccacatcttc
aaatgccctcccgaggacaagagcaaggtcatccgcgtgctgaacctgtggcaaaagaac
caggtgttcccccccgaggtgatccagcccatcttcgacctcgccgacccggagagcgcg
accagccgcgagatcgagcagcagctgctggccaaggagcagcagccgacgccggccgcg
ccgccgtccacggccgccggcgccgcggccggtccgcccggtgacggcccggcgccggcc
ggcagacaggcggagggggcgccggccactgcgcaagtggaccccggactgatccagaag
ctgcaccagctgcagaccctgctggcccagccgacagccacacccgaacaggcagcgccc
aagttcaaccagcgcctgttggacgacttcgactacgacgaggagccggacggcactccc
aagccggtcgagccgtctctcgagtcgctgggcacgttgctctccaacccggacgtgctg
aagcagctgcagggtctgcagcagacgctgcaggcgcagaagcagcaggagcagtcggag
cgcgaccgcaagttccggctgcaggagaacgagtttgacaagcagctggctcagacggtc
ggcagcctgccgttcgccagcgagatcgagctgaagccaccatcggccagcgagctggcg
atgatgtcggccatgtcggcgccgctggcggccaccggcgaccgcgacatgcggctggag
ctggcgccggagctggcggtgccgccgccgcgccgccccgccagcccgctggaggagggc
gagcgcggcccggacacggacaacgacgaccgcgccagggaccgggacgagcgggaacgc
gagtcggagcgggagcgagagcgagagaggaagaagcgcggcctgccggcgctgaagccc
gaccacctaggagtgtgcagcaccacgctgtgggtgggccacctctcgaagctggtgcac
caggaggacctgagtgacctgtttggcgagtacggcgacgtgctcagcatcgacctgatc
ccgccgcgcggctgcgccttcatctgcatgaaccggcgacaggacgcggcgcgcgccctg
ctcaagctcaagaaccacaagctgcagggcaagcccatcacgatcgcctgggcgccgggc
aagggcatgaaaggcaaggatttcaaggactactgggaggtggaggcgggctgctcgtac
attcctcacggccggctgaccgtgatgagcgacctggacgccatggaggagggcggcatg
atcgacgaccagtcggtgcccgactggctcaaggggcggtaccagcagctgcatcagatg
gaccagctgccggtgtcggcggtgcccgtgctgggcgacccgatgcagcagctggcgatg
ccggcaccggccggcgccggcaccgcgccgtttgtgacgctgcccaccagcctgccgccg
cagcagcagctcatggcgccgtccgagccggccggtcaggccatgcagcccatgatggcg
tccgtgccgccgccggtgagcgtggcgctgaacctggcgttcggcggcgcccgaccgccg
ggcctgatgagcctgccgccgatgggtctgccgccgccggccctgctgcccacggccagc
agcgtgctcggccagccgctgctgtctgcgccacccggcgccgcccagccgttgcagccc
ggtcagctgatgacgtcacaagccggcatggccgaccagactgctgcagcagaatcagct
gatgacgtcacaggcgggacaggggctgcagcaaagccagctgatgacatcacagcctgg
catggcagggcagggactacagcagaatcaactgatgacgtcacagcccggcatgacggc
acacgggtttcagcagaatcagctgatgacgtcacagcccgggatgccagcgcagggtct
tcagcagaaccagctgatgacgtcacagccggggatgtcagcacagggtcttcagcaaag
tcagctgatgacgtcacagcccgggatgaccacgcagggtttgcagcaaaatcagctaat
ggcttcacagctgatgacttcttcaggcggtgctctctcctcgctgtcggcgccgccgcc
gctgaccatgtcgacgctgtcggcgcctccgcctctcaccatgtcggcgctgtcgggccc
gccgccgctgggcctgggctcgctgctgggggcgccgccgggcgccggcctgctgccggg
cgcgctgctggggccgccgccgtcggcctccaccaccgtcgagccgatggatatcgactc
ggacgcggcgccgcaggtcaacggccagccggagccgggcgcgcgcgacaccgaccgacg
ggagggaacgccgcggcgacagagggccagtcggtggggcgccggtccggagaacgccgc
cgccagcaaggacgacggcaagaagggcgatgcggaggagcggcaccgctccctgatggc
gcgcctcaccagcttggccaacaccagcgtcagcgcgctgccacagcgcgagcgcgaccg
ggagcgagagcgcgagcgcgacagggaccgcgagcgcgaccgaga
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