Pollicipes pollicipes (gooseneck barnacle): 119100292
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Entry
119100292 CDS
T08250
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04120
Ubiquitin mediated proteolysis
ppoi04137
Mitophagy - animal
ppoi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119100292
04120 Ubiquitin mediated proteolysis
119100292
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119100292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119100292
04121 Ubiquitin system [BR:
ppoi04121
]
119100292
03029 Mitochondrial biogenesis [BR:
ppoi03029
]
119100292
Enzymes [BR:
ppoi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
119100292
Membrane trafficking [BR:
ppoi04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
119100292
Aggrephagy
Other aggrephagy associated proteins
119100292
Xenophagy
Other xenophagy associated proteins
119100292
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
119100292
Mitochondrial biogenesis [BR:
ppoi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
119100292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
IBR_1
IBR
Rcat_RNF216
Motif
Other DBs
NCBI-GeneID:
119100292
NCBI-ProteinID:
XP_037079293
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MQECVQEGAFTVRRDPCSWEDVLLPRRVPGTCDTAGCDGDTAQFFFKCGEHASLGEEDQA
VPLDLVRNNLRQIPCLACADTADLVVAYPCPAGHVTCLECFVTYCRSRLDERQFVQDAQL
GYTLGCPAGCQRSLITEAHHFRLMGDQQYERYQRFATEECLLQAGGVLCPRPDCGMGLLP
DELCRRVQCQQGCGFVFCRDCLQGYHMGECDPAGGAAGSATDGARAFGVDEVAQARWEEA
TRTAIQVLTKPCPKCRTPTERDGGCMHMICPRSQCGYHWCWVCQTEWTRECMGNHWFG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagtgtgtgcaggagggggcgttcacggtgcgccgcgacccgtgttcctgggaa
gacgtgctgctgccgcgccgcgtgcccggcacgtgcgacactgccggttgcgacggcgac
acggcccagttcttcttcaagtgcggcgagcacgccagcctgggcgaggaggaccaggcg
gtgccgctggacctcgtgcgcaacaacttgcgccagatcccctgcctggcctgcgccgac
accgcagacctggtggtggcatacccgtgcccggccggccacgtcacctgtctggagtgc
ttcgtcacgtactgccgaagccggctggatgagcgccagttcgtgcaggatgcgcagctg
ggctacacgctcggctgtccggccggctgtcagcgctccctcatcaccgaggctcaccac
ttccggctgatgggcgaccagcagtacgagcgctaccagcgattcgcgaccgaggagtgc
ctgctacaggcgggcggcgtgctctgtccgcggcccgactgcggcatgggcctgctgccg
gacgagctgtgccgccgcgtccagtgccagcagggctgtgggtttgtcttctgccgagat
tgtctgcagggctaccacatgggagaatgcgaccccgcaggcggcgctgcgggctcggcg
accgatggcgcgcgagcgttcggcgtggacgaggtggcgcaggcgcgctgggaggaggcg
acgcggacggccatccaggtgctgaccaagccgtgccccaagtgccggacgccgacggag
cgtgacggcggctgcatgcacatgatctgcccgcgctcacagtgcgggtaccactggtgc
tgggtgtgccagaccgagtggactcgcgagtgcatgggcaaccactggttcgggtag
DBGET
integrated database retrieval system
